RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 IGKV2D-26A0A0A0MRZ7 120 aa15.13■□□□□ 0.01
SMARCAL1-208ENST00000434435 CNBPP62633 177 aaKnown RBP15.13■□□□□ 0.01
SMARCAL1-208ENST00000434435 SFTA2Q6UW10 78 aa15.13■□□□□ 0.01
SMARCAL1-208ENST00000434435 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.12■□□□□ 0.01
SMARCAL1-208ENST00000434435 NMUP48645 174 aa15.12■□□□□ 0.01
SMARCAL1-208ENST00000434435 Q6ZRU5 148 aa15.12■□□□□ 0.01
SMARCAL1-208ENST00000434435 SMIM6P0DI80 62 aa15.11■□□□□ 0.01
SMARCAL1-208ENST00000434435 CDPF1Q6NVV7 123 aa15.11■□□□□ 0.01
SMARCAL1-208ENST00000434435 UNQ6190/PRO20217Q6UXQ8 127 aa15.11■□□□□ 0.01
SMARCAL1-208ENST00000434435 NDUFA12Q9UI09 145 aa15.11■□□□□ 0.01
SMARCAL1-208ENST00000434435 PAM16Q9Y3D7 125 aa15.11■□□□□ 0.01
SMARCAL1-208ENST00000434435 SLPIP03973 132 aa15.1■□□□□ 0.01
SMARCAL1-208ENST00000434435 FAT2Q9NYQ8 4349 aa15.1■□□□□ 0.01
SMARCAL1-208ENST00000434435 C10orf25Q5T742 122 aa15.09■□□□□ 0.01
SMARCAL1-208ENST00000434435 ZNF625Q96I27 306 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-208ENST00000434435 TRBV30A0A0K0K1B3 111 aa15.08■□□□□ 0
SMARCAL1-208ENST00000434435 MYMXA0A1B0GTQ4 84 aa15.08■□□□□ 0
SMARCAL1-208ENST00000434435 SPATA45Q537H7 98 aa15.08■□□□□ 0
SMARCAL1-208ENST00000434435 IGLV5-52A0A0A0MRZ9 124 aa15.07■□□□□ 0
SMARCAL1-208ENST00000434435 RYR3Q15413 4870 aa15.06■□□□□ 0
SMARCAL1-208ENST00000434435 HERV-K104P63124 156 aa15.06■□□□□ 0
SMARCAL1-208ENST00000434435 S100A12P80511 92 aa15.06■□□□□ 0
SMARCAL1-208ENST00000434435 C6orf48Q9UBA6 75 aa15.06■□□□□ 0
SMARCAL1-208ENST00000434435 ZNF815PA8K554 130 aa15.05■□□□□ -0
SMARCAL1-208ENST00000434435 RNF151Q2KHN1 245 aa15.05■□□□□ -0
SMARCAL1-208ENST00000434435 FUSP35637 526 aaKnown RBP eCLIP15.04■□□□□ -0
SMARCAL1-208ENST00000434435 KRTAP10-2P60368 255 aa15.04■□□□□ -0
SMARCAL1-208ENST00000434435 TTTY13Q9BZ97 58 aa15.04■□□□□ -0
SMARCAL1-208ENST00000434435 PGPEP1Q9NXJ5 209 aa15.04■□□□□ -0
SMARCAL1-208ENST00000434435 A0A1B0GVY2 172 aa15.03■□□□□ -0
SMARCAL1-208ENST00000434435 PCP2Q8IVA1 136 aa15.03■□□□□ -0
SMARCAL1-208ENST00000434435 C9orf163Q8N9P6 203 aa15.03■□□□□ -0
SMARCAL1-208ENST00000434435 HECTD4Q9Y4D8 3996 aa15.03■□□□□ -0
SMARCAL1-208ENST00000434435 DNAH11Q96DT5 4516 aa15.02□□□□□ -0.01
SMARCAL1-208ENST00000434435 PKD1P98161 4303 aa15□□□□□ -0.01
SMARCAL1-208ENST00000434435 C9orf116Q5BN46 136 aaPredicted RBP15□□□□□ -0.01
SMARCAL1-208ENST00000434435 MEIG1Q5JSS6 88 aa15□□□□□ -0.01
SMARCAL1-208ENST00000434435 ERG28Q9UKR5 140 aa15□□□□□ -0.01
SMARCAL1-208ENST00000434435 PKIGQ9Y2B9 76 aa15□□□□□ -0.01
SMARCAL1-208ENST00000434435 COX8AP10176 69 aa14.99□□□□□ -0.01
SMARCAL1-208ENST00000434435 LINC00587B1AMM8 73 aa14.98□□□□□ -0.01
SMARCAL1-208ENST00000434435 A0A0J9YXY3 114 aa14.97□□□□□ -0.01
SMARCAL1-208ENST00000434435 LOC107984640A0A0U1RRK4 108 aa14.97□□□□□ -0.01
SMARCAL1-208ENST00000434435 TLX1NBP0CAT3 122 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 PFN2P35080 140 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 COX17Q14061 63 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 LINC01620Q4KN68 170 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 SCGB1D4Q6XE38 83 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 C14orf144Q96I85 54 aa14.96□□□□□ -0.01
SMARCAL1-208ENST00000434435 NDUFC2-KCTD14E9PQ53 114 aa14.95□□□□□ -0.02
SMARCAL1-208ENST00000434435 RPL18AQ02543 176 aaKnown RBP14.95□□□□□ -0.02
SMARCAL1-208ENST00000434435 BOD1L2Q8IYS8 172 aa14.95□□□□□ -0.02
SMARCAL1-208ENST00000434435 C12orf57Q99622 126 aa14.95□□□□□ -0.02
SMARCAL1-208ENST00000434435 DLEU1O43261 78 aa14.94□□□□□ -0.02
SMARCAL1-208ENST00000434435 SMIM13P0DJ93 91 aa14.94□□□□□ -0.02
SMARCAL1-208ENST00000434435 LINC00158P58513 81 aa14.94□□□□□ -0.02
SMARCAL1-208ENST00000434435 GCSHP23434 173 aa14.93□□□□□ -0.02
SMARCAL1-208ENST00000434435 CIRBPQ14011 172 aaKnown RBP14.93□□□□□ -0.02
SMARCAL1-208ENST00000434435 SLC25A34Q6PIV7 304 aa14.93□□□□□ -0.02
SMARCAL1-208ENST00000434435 A0A0U1RRA0 63 aa14.92□□□□□ -0.02
SMARCAL1-208ENST00000434435 TIMM17BO60830 172 aa14.91□□□□□ -0.02
SMARCAL1-208ENST00000434435 SDIM1Q6ZPB5 146 aa14.91□□□□□ -0.02
SMARCAL1-208ENST00000434435 Q6ZRP5 223 aa14.91□□□□□ -0.02
SMARCAL1-208ENST00000434435 TP73-AS1Q9UF72 201 aa14.91□□□□□ -0.02
SMARCAL1-208ENST00000434435 GAGE2BQ13066 116 aa14.9□□□□□ -0.02
SMARCAL1-208ENST00000434435 C16orf90A8MZG2 172 aa14.89□□□□□ -0.03
SMARCAL1-208ENST00000434435 LINC00518Q8N0U6 118 aa14.89□□□□□ -0.03
SMARCAL1-208ENST00000434435 DNAH5Q8TE73 4624 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 A0A096LNI7 61 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 TMEM238C9JI98 176 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 PTTG1IPP53801 180 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 GAGE2EQ4V326 116 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 GAGE2DQ9UEU5 116 aa14.88□□□□□ -0.03
SMARCAL1-208ENST00000434435 MIR7-3HGQ8N6C7 128 aa14.87□□□□□ -0.03
SMARCAL1-208ENST00000434435 IGKV2-24A0A0C4DH68 120 aa14.86□□□□□ -0.03
SMARCAL1-208ENST00000434435 LITAFQ99732 161 aa14.86□□□□□ -0.03
SMARCAL1-208ENST00000434435 UQCR10Q9UDW1 63 aa14.85□□□□□ -0.03
SMARCAL1-208ENST00000434435 KRTAP10-1P60331 282 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 ADAMTSL4-AS1Q5T5F5 129 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 DAND5Q8N907 189 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 PRO1933Q9H354 126 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 SND1-IT1Q9HBX3 110 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 LINC00474Q9P2X8 69 aa14.84□□□□□ -0.03
SMARCAL1-208ENST00000434435 CHTF8P0CG12 524 aa14.83□□□□□ -0.04
SMARCAL1-208ENST00000434435 SPANXDQ9BXN6 97 aa14.83□□□□□ -0.04
SMARCAL1-208ENST00000434435 XAGE1AQ9HD64 81 aa14.83□□□□□ -0.04
SMARCAL1-208ENST00000434435 SPANXCQ9NY87 97 aa14.83□□□□□ -0.04
SMARCAL1-208ENST00000434435 SPANXB1Q9NS25 103 aaPredicted RBP14.81□□□□□ -0.04
SMARCAL1-208ENST00000434435 HIGD1BQ9P298 99 aa14.81□□□□□ -0.04
SMARCAL1-208ENST00000434435 C9orf129Q5T035 196 aaKnown RBP14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 C2orf91Q6ZV80 131 aa14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 Q6ZVH6 145 aa14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 SPACA4Q8TDM5 124 aa14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 MIEN1Q9BRT3 115 aa14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.8□□□□□ -0.04
SMARCAL1-208ENST00000434435 PKHD1P08F94 4074 aa14.79□□□□□ -0.04
SMARCAL1-208ENST00000434435 TSTD3H0UI37 97 aa14.78□□□□□ -0.04
SMARCAL1-208ENST00000434435 NPC2P61916 151 aa14.78□□□□□ -0.04
SMARCAL1-208ENST00000434435 PANO1I0J062 215 aa14.77□□□□□ -0.05
SMARCAL1-208ENST00000434435 SRSF9Q13242 221 aaKnown RBP eCLIP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms