RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 CDC42SE2Q9NRR3 84 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 SPANXA1Q9NS26 97 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 PLAC8Q9NZF1 115 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 LAMTOR2Q9Y2Q5 125 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 V9GYV3 84 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 IGLV4-69A0A075B6H9 119 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 LINC01549A6NIU2 74 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 K7EMI3 77 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 COX7A2LO14548 114 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 XCL1P47992 114 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 RPL23P62829 140 aaKnown RBP3.42□□□□□ -1.86
HDAC9-213ENST00000433709 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 IMMP2LQ96T52 175 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 TMEM242Q9NWH2 141 aa3.42□□□□□ -1.86
HDAC9-213ENST00000433709 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 VPS13DQ5THJ4 4388 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 LOC107984640A0A0U1RRK4 108 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 IFI27P40305 119 aaPredicted RBP3.41□□□□□ -1.86
HDAC9-213ENST00000433709 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
HDAC9-213ENST00000433709 COX6A2Q02221 97 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 MAJINQ3KP22 176 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 ORMDL3Q8N138 153 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 C15orf56Q8N910 161 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 OR10D4PQ8NGN7 298 aa3.41□□□□□ -1.86
HDAC9-213ENST00000433709 TGIF2-C20orf24A0A0A6YYL0 155 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 SEC11AP67812 179 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 MRPL51Q4U2R6 128 aaKnown RBP3.4□□□□□ -1.87
HDAC9-213ENST00000433709 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 Q6ZN92 141 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 C2orf88Q9BSF0 95 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
HDAC9-213ENST00000433709 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 HERC2O95714 4834 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 TRAV13-1A0A0B4J241 112 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 NDUFA1O15239 70 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 COX19Q49B96 90 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 ORMDL2Q53FV1 153 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 TMEM136Q6ZRR5 245 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
HDAC9-213ENST00000433709 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 TRAV9-1A0A075B6T8 112 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 D6R8Y8 96 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 KRTAP10-4P60372 401 aaPredicted RBP3.38□□□□□ -1.87
HDAC9-213ENST00000433709 MRPL54Q6P161 138 aaKnown RBP3.38□□□□□ -1.87
HDAC9-213ENST00000433709 TEX43Q6ZNM6 134 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 Q8N9L7 120 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 PRELID3AQ96N28 172 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 NXT2Q9NPJ8 142 aaKnown RBP3.38□□□□□ -1.87
HDAC9-213ENST00000433709 MRPL35Q9NZE8 188 aaKnown RBP3.38□□□□□ -1.87
HDAC9-213ENST00000433709 CYSLTR1Q9Y271 337 aa3.38□□□□□ -1.87
HDAC9-213ENST00000433709 DMBT1Q9UGM3 2413 aaPredicted RBP3.37□□□□□ -1.87
HDAC9-213ENST00000433709 A0A096LNI7 61 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 SMKR1H3BMG3 65 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 S100PP25815 95 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
HDAC9-213ENST00000433709 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 UQCC3Q6UW78 93 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 ORAOV1Q8WV07 137 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 TMEM141Q96I45 108 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 PACRGQ96M98 296 aaPredicted RBP3.37□□□□□ -1.87
HDAC9-213ENST00000433709 VCX2Q9H322 139 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 PKD1P98161 4303 aa3.37□□□□□ -1.87
HDAC9-213ENST00000433709 DNAH17Q9UFH2 4485 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 MT-ND6P03923 174 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 TLX1NBP0CAT3 122 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 HERVK_113P63121 156 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
HDAC9-213ENST00000433709 Q6ZUT4 128 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 Q8N8P6 123 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 LINC01600Q96MT4 127 aa3.36□□□□□ -1.87
HDAC9-213ENST00000433709 C9JQL5 133 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 NPYP01303 97 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 CXCL5P42830 114 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 CKS1BP61024 79 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 CLLU1Q5K131 121 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 FAT2Q9NYQ8 4349 aa3.35□□□□□ -1.87
HDAC9-213ENST00000433709 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
HDAC9-213ENST00000433709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
HDAC9-213ENST00000433709 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
HDAC9-213ENST00000433709 C9orf116Q5BN46 136 aaPredicted RBP3.34□□□□□ -1.87
HDAC9-213ENST00000433709 C6orf226Q5I0X4 101 aa3.34□□□□□ -1.87
HDAC9-213ENST00000433709 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms