RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
RPUSD3-207ENST00000433555 HNRNPA3P51991 378 aaKnown RBP11.88□□□□□ -0.51
RPUSD3-207ENST00000433555 NDUFA6P56556 154 aa11.88□□□□□ -0.51
RPUSD3-207ENST00000433555 Q8IZM0 81 aa11.88□□□□□ -0.51
RPUSD3-207ENST00000433555 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-207ENST00000433555 ATP5LO75964 103 aa11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 SPINK8P0C7L1 97 aa11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 Q6ZRP5 223 aa11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
RPUSD3-207ENST00000433555 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
RPUSD3-207ENST00000433555 FAM19A2Q8N3H0 131 aa11.86□□□□□ -0.51
RPUSD3-207ENST00000433555 TRBV30A0A0K0K1B3 111 aa11.85□□□□□ -0.51
RPUSD3-207ENST00000433555 A0A1W2PNN7 141 aa11.85□□□□□ -0.51
RPUSD3-207ENST00000433555 SERF1AO75920 110 aa11.85□□□□□ -0.51
RPUSD3-207ENST00000433555 PRSS2P07478 247 aa11.85□□□□□ -0.51
RPUSD3-207ENST00000433555 ZNF22P17026 224 aaPredicted RBP11.85□□□□□ -0.51
RPUSD3-207ENST00000433555 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
RPUSD3-207ENST00000433555 HSBP1O75506 76 aa11.84□□□□□ -0.51
RPUSD3-207ENST00000433555 NUPR1O60356 82 aa11.83□□□□□ -0.52
RPUSD3-207ENST00000433555 COX7B2Q8TF08 81 aa11.83□□□□□ -0.52
RPUSD3-207ENST00000433555 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 CKS1BP61024 79 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 C6orf226Q5I0X4 101 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
RPUSD3-207ENST00000433555 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
RPUSD3-207ENST00000433555 KRTAP7-1Q8IUC3 87 aa11.8□□□□□ -0.52
RPUSD3-207ENST00000433555 CHTOPQ9Y3Y2 248 aaKnown RBP11.8□□□□□ -0.52
RPUSD3-207ENST00000433555 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 F8VRH5 84 aa11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 H3BRM9 83 aa11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 C9orf129Q5T035 196 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
RPUSD3-207ENST00000433555 LRP1Q07954 4544 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-207ENST00000433555 TRAV12-1A0A0B4J245 112 aa11.78□□□□□ -0.52
RPUSD3-207ENST00000433555 CXCL5P42830 114 aa11.78□□□□□ -0.52
RPUSD3-207ENST00000433555 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-207ENST00000433555 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
RPUSD3-207ENST00000433555 FAM19A5Q7Z5A7 132 aaPredicted RBP11.77□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BKO60814 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BJP06899 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BOP23527 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BBP33778 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BDP58876 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BCP62807 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
RPUSD3-207ENST00000433555 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
RPUSD3-207ENST00000433555 H0Y8G0 127 aa11.74□□□□□ -0.53
RPUSD3-207ENST00000433555 LEPROTL1O95214 131 aa11.74□□□□□ -0.53
RPUSD3-207ENST00000433555 ODF1Q14990 250 aa11.73□□□□□ -0.53
RPUSD3-207ENST00000433555 KRTAP11-1Q8IUC1 163 aa11.73□□□□□ -0.53
RPUSD3-207ENST00000433555 XAGE1AQ9HD64 81 aa11.73□□□□□ -0.53
RPUSD3-207ENST00000433555 TMEM223A0PJW6 202 aa11.71□□□□□ -0.53
RPUSD3-207ENST00000433555 FABP4P15090 132 aa11.71□□□□□ -0.53
RPUSD3-207ENST00000433555 SERTAD4-AS1Q5TG53 156 aa11.71□□□□□ -0.53
RPUSD3-207ENST00000433555 M0QXV9 152 aa11.69□□□□□ -0.54
RPUSD3-207ENST00000433555 ATP6V1G1O75348 118 aa11.69□□□□□ -0.54
RPUSD3-207ENST00000433555 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
RPUSD3-207ENST00000433555 HSPB8Q9UJY1 196 aa11.68□□□□□ -0.54
RPUSD3-207ENST00000433555 KRTAP29-1A8MX34 341 aaPredicted RBP11.67□□□□□ -0.54
RPUSD3-207ENST00000433555 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
RPUSD3-207ENST00000433555 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
RPUSD3-207ENST00000433555 DMBT1Q9UGM3 2413 aaPredicted RBP11.67□□□□□ -0.54
RPUSD3-207ENST00000433555 HERC1Q15751 4861 aa11.66□□□□□ -0.54
RPUSD3-207ENST00000433555 PFN2P35080 140 aa11.64□□□□□ -0.55
RPUSD3-207ENST00000433555 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
RPUSD3-207ENST00000433555 TSPEAR-AS2P59090 65 aa11.63□□□□□ -0.55
RPUSD3-207ENST00000433555 S100A1P23297 94 aa11.62□□□□□ -0.55
RPUSD3-207ENST00000433555 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
RPUSD3-207ENST00000433555 COA6Q5JTJ3 125 aaKnown RBP11.61□□□□□ -0.55
RPUSD3-207ENST00000433555 C22orf24Q9Y442 160 aa11.61□□□□□ -0.55
RPUSD3-207ENST00000433555 J3QL48 77 aa11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 DPM2O94777 84 aa11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 OXTP01178 125 aa11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 PLNP26678 52 aa11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
RPUSD3-207ENST00000433555 UBE2BP63146 152 aa11.59□□□□□ -0.55
RPUSD3-207ENST00000433555 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
RPUSD3-207ENST00000433555 IGKCP01834 107 aa11.58□□□□□ -0.56
RPUSD3-207ENST00000433555 Q8NDZ9 215 aa11.58□□□□□ -0.56
RPUSD3-207ENST00000433555 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
RPUSD3-207ENST00000433555 TNXBP22105 4242 aa11.58□□□□□ -0.56
RPUSD3-207ENST00000433555 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
RPUSD3-207ENST00000433555 SFTA2Q6UW10 78 aa11.57□□□□□ -0.56
RPUSD3-207ENST00000433555 IGLV5-37A0A075B6J1 123 aa11.56□□□□□ -0.56
RPUSD3-207ENST00000433555 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
RPUSD3-207ENST00000433555 SPINK6Q6UWN8 80 aa11.56□□□□□ -0.56
RPUSD3-207ENST00000433555 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
RPUSD3-207ENST00000433555 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
RPUSD3-207ENST00000433555 LEPROTO15243 131 aa11.55□□□□□ -0.56
RPUSD3-207ENST00000433555 IGLV7-43P04211 117 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms