RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 GCSHP23434 173 aa9.35□□□□□ -0.91
LAMA4-208ENST00000431543 CKS1BP61024 79 aa9.35□□□□□ -0.91
LAMA4-208ENST00000431543 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
LAMA4-208ENST00000431543 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
LAMA4-208ENST00000431543 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
LAMA4-208ENST00000431543 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 E9PLD3 99 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 F8WDY8 70 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 LEPROTO15243 131 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 Q8IZM0 81 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
LAMA4-208ENST00000431543 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
LAMA4-208ENST00000431543 SMIM6P0DI80 62 aa9.33□□□□□ -0.92
LAMA4-208ENST00000431543 LGALS3P17931 250 aaKnown RBP9.33□□□□□ -0.92
LAMA4-208ENST00000431543 XGP55808 180 aa9.33□□□□□ -0.92
LAMA4-208ENST00000431543 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
LAMA4-208ENST00000431543 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
LAMA4-208ENST00000431543 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
LAMA4-208ENST00000431543 CXCL5P42830 114 aa9.32□□□□□ -0.92
LAMA4-208ENST00000431543 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
LAMA4-208ENST00000431543 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
LAMA4-208ENST00000431543 J3QQQ9 107 aa9.31□□□□□ -0.92
LAMA4-208ENST00000431543 NMUP48645 174 aa9.31□□□□□ -0.92
LAMA4-208ENST00000431543 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
LAMA4-208ENST00000431543 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
LAMA4-208ENST00000431543 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
LAMA4-208ENST00000431543 HAMPP81172 84 aa9.3□□□□□ -0.92
LAMA4-208ENST00000431543 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
LAMA4-208ENST00000431543 PAM16Q9Y3D7 125 aa9.3□□□□□ -0.92
LAMA4-208ENST00000431543 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
LAMA4-208ENST00000431543 NDUFA1O15239 70 aa9.29□□□□□ -0.92
LAMA4-208ENST00000431543 MAJINQ3KP22 176 aa9.29□□□□□ -0.92
LAMA4-208ENST00000431543 SPATA45Q537H7 98 aa9.29□□□□□ -0.92
LAMA4-208ENST00000431543 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
LAMA4-208ENST00000431543 LINC00587B1AMM8 73 aa9.28□□□□□ -0.92
LAMA4-208ENST00000431543 HERV-K104P63124 156 aa9.28□□□□□ -0.92
LAMA4-208ENST00000431543 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
LAMA4-208ENST00000431543 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
LAMA4-208ENST00000431543 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
LAMA4-208ENST00000431543 SYCNQ0VAF6 134 aa9.27□□□□□ -0.93
LAMA4-208ENST00000431543 KIAA0087Q14695 138 aa9.27□□□□□ -0.93
LAMA4-208ENST00000431543 Q8N1X5 172 aa9.26□□□□□ -0.93
LAMA4-208ENST00000431543 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
LAMA4-208ENST00000431543 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
LAMA4-208ENST00000431543 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
LAMA4-208ENST00000431543 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
LAMA4-208ENST00000431543 ZNF815PA8K554 130 aa9.25□□□□□ -0.93
LAMA4-208ENST00000431543 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
LAMA4-208ENST00000431543 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
LAMA4-208ENST00000431543 SMR3BP02814 79 aaPredicted RBP9.24□□□□□ -0.93
LAMA4-208ENST00000431543 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
LAMA4-208ENST00000431543 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
LAMA4-208ENST00000431543 C2orf82Q6UX34 121 aa9.24□□□□□ -0.93
LAMA4-208ENST00000431543 UNQ6190/PRO20217Q6UXQ8 127 aa9.24□□□□□ -0.93
LAMA4-208ENST00000431543 CARD19Q96LW7 228 aa9.24□□□□□ -0.93
LAMA4-208ENST00000431543 C12orf57Q99622 126 aa9.24□□□□□ -0.93
LAMA4-208ENST00000431543 COX8AP10176 69 aa9.23□□□□□ -0.93
LAMA4-208ENST00000431543 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
LAMA4-208ENST00000431543 MEIG1Q5JSS6 88 aa9.23□□□□□ -0.93
LAMA4-208ENST00000431543 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
LAMA4-208ENST00000431543 COX17Q14061 63 aa9.22□□□□□ -0.93
LAMA4-208ENST00000431543 SLC25A34Q6PIV7 304 aa9.22□□□□□ -0.93
LAMA4-208ENST00000431543 Q6ZSA8 131 aa9.22□□□□□ -0.93
LAMA4-208ENST00000431543 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
LAMA4-208ENST00000431543 FAT1Q14517 4588 aa9.21□□□□□ -0.93
LAMA4-208ENST00000431543 DLEU1O43261 78 aa9.21□□□□□ -0.94
LAMA4-208ENST00000431543 Q6ZRU5 148 aa9.21□□□□□ -0.94
LAMA4-208ENST00000431543 PCP2Q8IVA1 136 aa9.21□□□□□ -0.94
LAMA4-208ENST00000431543 C14orf144Q96I85 54 aa9.21□□□□□ -0.94
LAMA4-208ENST00000431543 SLPIP03973 132 aa9.2□□□□□ -0.94
LAMA4-208ENST00000431543 LINC00158P58513 81 aa9.2□□□□□ -0.94
LAMA4-208ENST00000431543 LINC00518Q8N0U6 118 aa9.2□□□□□ -0.94
LAMA4-208ENST00000431543 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
LAMA4-208ENST00000431543 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
LAMA4-208ENST00000431543 BOD1L2Q8IYS8 172 aa9.19□□□□□ -0.94
LAMA4-208ENST00000431543 TTTY13Q9BZ97 58 aa9.19□□□□□ -0.94
LAMA4-208ENST00000431543 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
LAMA4-208ENST00000431543 A0A0J9YXY3 114 aa9.18□□□□□ -0.94
LAMA4-208ENST00000431543 LCE2BO14633 110 aa9.18□□□□□ -0.94
LAMA4-208ENST00000431543 PFN2P35080 140 aa9.18□□□□□ -0.94
LAMA4-208ENST00000431543 C9orf163Q8N9P6 203 aa9.18□□□□□ -0.94
LAMA4-208ENST00000431543 UQCR10Q9UDW1 63 aa9.18□□□□□ -0.94
LAMA4-208ENST00000431543 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 TSTD3H0UI37 97 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 TIMM17BO60830 172 aa9.17□□□□□ -0.94
LAMA4-208ENST00000431543 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
LAMA4-208ENST00000431543 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
LAMA4-208ENST00000431543 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.94
LAMA4-208ENST00000431543 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
LAMA4-208ENST00000431543 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
LAMA4-208ENST00000431543 Q5VSD8 79 aa9.15□□□□□ -0.94
LAMA4-208ENST00000431543 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
LAMA4-208ENST00000431543 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
LAMA4-208ENST00000431543 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
LAMA4-208ENST00000431543 PANO1I0J062 215 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms