RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
TTC28-202ENST00000431039 PSCAO43653 123 aa10.86□□□□□ -0.67
TTC28-202ENST00000431039 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
TTC28-202ENST00000431039 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
TTC28-202ENST00000431039 HSBP1L1C9JCN9 74 aa10.85□□□□□ -0.67
TTC28-202ENST00000431039 E9PLD3 99 aa10.85□□□□□ -0.67
TTC28-202ENST00000431039 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
TTC28-202ENST00000431039 IGLV5-52A0A0A0MRZ9 124 aa10.83□□□□□ -0.68
TTC28-202ENST00000431039 LEPROTO15243 131 aa10.83□□□□□ -0.68
TTC28-202ENST00000431039 MAJINQ3KP22 176 aa10.83□□□□□ -0.68
TTC28-202ENST00000431039 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
TTC28-202ENST00000431039 USP17L23D6RBM5 183 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 C15orf56Q8N910 161 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 ORAOV1Q8WV07 137 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 VAMP8Q9BV40 100 aa10.82□□□□□ -0.68
TTC28-202ENST00000431039 GVQW2A0A096LPI5 108 aaPredicted RBP10.81□□□□□ -0.68
TTC28-202ENST00000431039 LRCOL1A6NCL2 159 aa10.81□□□□□ -0.68
TTC28-202ENST00000431039 Q8IZM0 81 aa10.81□□□□□ -0.68
TTC28-202ENST00000431039 SPAG11BQ08648 103 aa10.8□□□□□ -0.68
TTC28-202ENST00000431039 KIAA0087Q14695 138 aa10.8□□□□□ -0.68
TTC28-202ENST00000431039 COX7B2Q8TF08 81 aa10.8□□□□□ -0.68
TTC28-202ENST00000431039 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 J3QQQ9 107 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 PRSS2P07478 247 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 S100A12P80511 92 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
TTC28-202ENST00000431039 F8WDY8 70 aa10.78□□□□□ -0.68
TTC28-202ENST00000431039 WFDC2Q14508 124 aa10.78□□□□□ -0.68
TTC28-202ENST00000431039 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
TTC28-202ENST00000431039 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
TTC28-202ENST00000431039 PAM16Q9Y3D7 125 aa10.78□□□□□ -0.68
TTC28-202ENST00000431039 ZNF561-AS1K7EIQ3 104 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 LECT2O14960 151 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 LGALS3P17931 250 aaKnown RBP10.77□□□□□ -0.69
TTC28-202ENST00000431039 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 HIGD2BQ4VC39 106 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 SPATA45Q537H7 98 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 Q8N814 137 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 C2orf48Q96LS8 159 aa10.77□□□□□ -0.69
TTC28-202ENST00000431039 CXCL5P42830 114 aa10.76□□□□□ -0.69
TTC28-202ENST00000431039 NMUP48645 174 aa10.76□□□□□ -0.69
TTC28-202ENST00000431039 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
TTC28-202ENST00000431039 J3QL48 77 aa10.75□□□□□ -0.69
TTC28-202ENST00000431039 SFTA2Q6UW10 78 aa10.75□□□□□ -0.69
TTC28-202ENST00000431039 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
TTC28-202ENST00000431039 CKS1BP61024 79 aa10.74□□□□□ -0.69
TTC28-202ENST00000431039 LINC00518Q8N0U6 118 aa10.74□□□□□ -0.69
TTC28-202ENST00000431039 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
TTC28-202ENST00000431039 C12orf57Q99622 126 aa10.74□□□□□ -0.69
TTC28-202ENST00000431039 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
TTC28-202ENST00000431039 NDUFA1O15239 70 aa10.73□□□□□ -0.69
TTC28-202ENST00000431039 PCP2Q8IVA1 136 aa10.73□□□□□ -0.69
TTC28-202ENST00000431039 LINC00526Q96FQ7 95 aa10.73□□□□□ -0.69
TTC28-202ENST00000431039 COX8AP10176 69 aa10.72□□□□□ -0.69
TTC28-202ENST00000431039 HERV-K104P63124 156 aa10.72□□□□□ -0.69
TTC28-202ENST00000431039 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
TTC28-202ENST00000431039 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
TTC28-202ENST00000431039 TTTY13Q9BZ97 58 aa10.72□□□□□ -0.69
TTC28-202ENST00000431039 DLEU1O43261 78 aa10.71□□□□□ -0.69
TTC28-202ENST00000431039 SYCNQ0VAF6 134 aa10.71□□□□□ -0.69
TTC28-202ENST00000431039 UNQ6190/PRO20217Q6UXQ8 127 aa10.71□□□□□ -0.69
TTC28-202ENST00000431039 ZNF815PA8K554 130 aa10.7□□□□□ -0.7
TTC28-202ENST00000431039 SLPIP03973 132 aa10.7□□□□□ -0.7
TTC28-202ENST00000431039 CNBPP62633 177 aaKnown RBP10.7□□□□□ -0.7
TTC28-202ENST00000431039 BOD1L2Q8IYS8 172 aa10.7□□□□□ -0.7
TTC28-202ENST00000431039 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
TTC28-202ENST00000431039 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
TTC28-202ENST00000431039 C14orf144Q96I85 54 aa10.69□□□□□ -0.7
TTC28-202ENST00000431039 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
TTC28-202ENST00000431039 Q6ZRU5 148 aa10.68□□□□□ -0.7
TTC28-202ENST00000431039 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
TTC28-202ENST00000431039 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.67□□□□□ -0.7
TTC28-202ENST00000431039 LINC00587B1AMM8 73 aa10.67□□□□□ -0.7
TTC28-202ENST00000431039 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
TTC28-202ENST00000431039 SLC25A34Q6PIV7 304 aa10.67□□□□□ -0.7
TTC28-202ENST00000431039 CARD19Q96LW7 228 aa10.67□□□□□ -0.7
TTC28-202ENST00000431039 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
TTC28-202ENST00000431039 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.66□□□□□ -0.7
TTC28-202ENST00000431039 A0A0J9YXY3 114 aa10.66□□□□□ -0.7
TTC28-202ENST00000431039 C6orf48Q9UBA6 75 aa10.66□□□□□ -0.7
TTC28-202ENST00000431039 LRP1Q07954 4544 aaKnown RBP10.66□□□□□ -0.7
TTC28-202ENST00000431039 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
TTC28-202ENST00000431039 Q6ZSA8 131 aa10.65□□□□□ -0.7
TTC28-202ENST00000431039 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
TTC28-202ENST00000431039 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
TTC28-202ENST00000431039 UQCR10Q9UDW1 63 aa10.64□□□□□ -0.71
TTC28-202ENST00000431039 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
TTC28-202ENST00000431039 TIMM17BO60830 172 aa10.63□□□□□ -0.71
TTC28-202ENST00000431039 COX17Q14061 63 aa10.63□□□□□ -0.71
TTC28-202ENST00000431039 MEIG1Q5JSS6 88 aa10.63□□□□□ -0.71
TTC28-202ENST00000431039 SCGB1D4Q6XE38 83 aa10.63□□□□□ -0.71
TTC28-202ENST00000431039 KRTAP29-1A8MX34 341 aaPredicted RBP10.62□□□□□ -0.71
TTC28-202ENST00000431039 CIRBPQ14011 172 aaKnown RBP10.62□□□□□ -0.71
TTC28-202ENST00000431039 C9orf116Q5BN46 136 aaPredicted RBP10.62□□□□□ -0.71
TTC28-202ENST00000431039 C9orf163Q8N9P6 203 aa10.62□□□□□ -0.71
TTC28-202ENST00000431039 PRO1933Q9H354 126 aa10.62□□□□□ -0.71
TTC28-202ENST00000431039 TLX1NBP0CAT3 122 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms