RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
UBE3D-204ENST00000430071 H0Y8G0 127 aa10.79□□□□□ -0.68
UBE3D-204ENST00000430071 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
UBE3D-204ENST00000430071 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
UBE3D-204ENST00000430071 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
UBE3D-204ENST00000430071 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
UBE3D-204ENST00000430071 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-204ENST00000430071 ODF1Q14990 250 aa10.78□□□□□ -0.68
UBE3D-204ENST00000430071 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.68
UBE3D-204ENST00000430071 SYCNQ0VAF6 134 aa10.77□□□□□ -0.68
UBE3D-204ENST00000430071 C2orf48Q96LS8 159 aa10.77□□□□□ -0.68
UBE3D-204ENST00000430071 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.68
UBE3D-204ENST00000430071 F8VRH5 84 aa10.77□□□□□ -0.69
UBE3D-204ENST00000430071 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
UBE3D-204ENST00000430071 Q6ZRU5 148 aa10.77□□□□□ -0.69
UBE3D-204ENST00000430071 CAMK2N2Q96S95 79 aa10.77□□□□□ -0.69
UBE3D-204ENST00000430071 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
UBE3D-204ENST00000430071 J3QL48 77 aa10.76□□□□□ -0.69
UBE3D-204ENST00000430071 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
UBE3D-204ENST00000430071 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
UBE3D-204ENST00000430071 H3BRM9 83 aa10.75□□□□□ -0.69
UBE3D-204ENST00000430071 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
UBE3D-204ENST00000430071 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
UBE3D-204ENST00000430071 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
UBE3D-204ENST00000430071 TOMM7Q9P0U1 55 aa10.75□□□□□ -0.69
UBE3D-204ENST00000430071 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
UBE3D-204ENST00000430071 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
UBE3D-204ENST00000430071 Q8IZM0 81 aa10.74□□□□□ -0.69
UBE3D-204ENST00000430071 PMCHL2Q9BQD1 86 aa10.74□□□□□ -0.69
UBE3D-204ENST00000430071 A0A087WYN8 130 aa10.73□□□□□ -0.69
UBE3D-204ENST00000430071 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
UBE3D-204ENST00000430071 UNQ6190/PRO20217Q6UXQ8 127 aa10.73□□□□□ -0.69
UBE3D-204ENST00000430071 HIST3H2BBQ8N257 126 aa10.73□□□□□ -0.69
UBE3D-204ENST00000430071 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
UBE3D-204ENST00000430071 F8WDY8 70 aa10.72□□□□□ -0.69
UBE3D-204ENST00000430071 PRSS2P07478 247 aa10.72□□□□□ -0.69
UBE3D-204ENST00000430071 NDUFA1O15239 70 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 S100A6P06703 90 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 C3orf79P0CE67 100 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 SPACA4Q8TDM5 124 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
UBE3D-204ENST00000430071 TMEM223A0PJW6 202 aa10.7□□□□□ -0.7
UBE3D-204ENST00000430071 DPM2O94777 84 aa10.7□□□□□ -0.7
UBE3D-204ENST00000430071 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
UBE3D-204ENST00000430071 SNRPEP62304 92 aaKnown RBP10.69□□□□□ -0.7
UBE3D-204ENST00000430071 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
UBE3D-204ENST00000430071 DPH3Q96FX2 82 aa10.69□□□□□ -0.7
UBE3D-204ENST00000430071 PLNP26678 52 aa10.68□□□□□ -0.7
UBE3D-204ENST00000430071 KRTDAPP60985 99 aa10.68□□□□□ -0.7
UBE3D-204ENST00000430071 CKS1BP61024 79 aa10.68□□□□□ -0.7
UBE3D-204ENST00000430071 PET117Q6UWS5 81 aa10.68□□□□□ -0.7
UBE3D-204ENST00000430071 HIST1H2BLQ99880 126 aa10.68□□□□□ -0.7
UBE3D-204ENST00000430071 IGKV2-24A0A0C4DH68 120 aa10.67□□□□□ -0.7
UBE3D-204ENST00000430071 IGKCP01834 107 aa10.67□□□□□ -0.7
UBE3D-204ENST00000430071 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
UBE3D-204ENST00000430071 A0A096LNI7 61 aa10.66□□□□□ -0.7
UBE3D-204ENST00000430071 C5orf52A6NGY3 159 aa10.66□□□□□ -0.7
UBE3D-204ENST00000430071 S100A2P29034 98 aa10.66□□□□□ -0.7
UBE3D-204ENST00000430071 C9orf116Q5BN46 136 aaPredicted RBP10.66□□□□□ -0.7
UBE3D-204ENST00000430071 TRBV30A0A0K0K1B3 111 aa10.65□□□□□ -0.7
UBE3D-204ENST00000430071 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
UBE3D-204ENST00000430071 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
UBE3D-204ENST00000430071 LOC107984640A0A0U1RRK4 108 aa10.65□□□□□ -0.71
UBE3D-204ENST00000430071 CXCL5P42830 114 aa10.65□□□□□ -0.71
UBE3D-204ENST00000430071 OXTP01178 125 aa10.63□□□□□ -0.71
UBE3D-204ENST00000430071 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
UBE3D-204ENST00000430071 GAGE2BQ13066 116 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 Q6ZRP5 223 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 STPG4Q8N801 248 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
UBE3D-204ENST00000430071 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
UBE3D-204ENST00000430071 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
UBE3D-204ENST00000430071 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
UBE3D-204ENST00000430071 LEPROTO15243 131 aa10.59□□□□□ -0.71
UBE3D-204ENST00000430071 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
UBE3D-204ENST00000430071 C20orf202A1L168 122 aa10.58□□□□□ -0.72
UBE3D-204ENST00000430071 MT1HL1P0DM35 61 aa10.58□□□□□ -0.72
UBE3D-204ENST00000430071 HERVK_113P61574 105 aa10.58□□□□□ -0.72
UBE3D-204ENST00000430071 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
UBE3D-204ENST00000430071 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
UBE3D-204ENST00000430071 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
UBE3D-204ENST00000430071 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
UBE3D-204ENST00000430071 E9PLD3 99 aa10.56□□□□□ -0.72
UBE3D-204ENST00000430071 J3QQQ9 107 aa10.56□□□□□ -0.72
UBE3D-204ENST00000430071 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
UBE3D-204ENST00000430071 HMCN2Q8NDA2 5059 aa10.55□□□□□ -0.72
UBE3D-204ENST00000430071 SFTA2Q6UW10 78 aa10.55□□□□□ -0.72
UBE3D-204ENST00000430071 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
UBE3D-204ENST00000430071 A0A1W2PNN7 141 aa10.54□□□□□ -0.72
UBE3D-204ENST00000430071 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
UBE3D-204ENST00000430071 ERG28Q9UKR5 140 aa10.54□□□□□ -0.72
UBE3D-204ENST00000430071 PFN2P35080 140 aa10.53□□□□□ -0.72
UBE3D-204ENST00000430071 C7orf33Q8WU49 177 aa10.53□□□□□ -0.72
UBE3D-204ENST00000430071 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.72
UBE3D-204ENST00000430071 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.72
UBE3D-204ENST00000430071 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.72
UBE3D-204ENST00000430071 TNXBP22105 4242 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms