RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
SGCE-204ENST00000428696 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
SGCE-204ENST00000428696 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
SGCE-204ENST00000428696 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
SGCE-204ENST00000428696 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
SGCE-204ENST00000428696 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.91
SGCE-204ENST00000428696 KIAA0087Q14695 138 aa9.34□□□□□ -0.91
SGCE-204ENST00000428696 MAJINQ3KP22 176 aa9.34□□□□□ -0.91
SGCE-204ENST00000428696 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
SGCE-204ENST00000428696 PMCHL2Q9BQD1 86 aa9.34□□□□□ -0.91
SGCE-204ENST00000428696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.34□□□□□ -0.91
SGCE-204ENST00000428696 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
SGCE-204ENST00000428696 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
SGCE-204ENST00000428696 F8VRH5 84 aa9.33□□□□□ -0.92
SGCE-204ENST00000428696 Q8IZM0 81 aa9.33□□□□□ -0.92
SGCE-204ENST00000428696 F8WDY8 70 aa9.32□□□□□ -0.92
SGCE-204ENST00000428696 PANO1I0J062 215 aa9.32□□□□□ -0.92
SGCE-204ENST00000428696 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
SGCE-204ENST00000428696 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
SGCE-204ENST00000428696 KIAA1109Q2LD37 5005 aa9.32□□□□□ -0.92
SGCE-204ENST00000428696 A0A096LNI7 61 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 S100A6P06703 90 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 ODF1Q14990 250 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 Q6ZSA8 131 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
SGCE-204ENST00000428696 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
SGCE-204ENST00000428696 KRTDAPP60985 99 aa9.3□□□□□ -0.92
SGCE-204ENST00000428696 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
SGCE-204ENST00000428696 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
SGCE-204ENST00000428696 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
SGCE-204ENST00000428696 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
SGCE-204ENST00000428696 DPM2O94777 84 aa9.29□□□□□ -0.92
SGCE-204ENST00000428696 STPG4Q8N801 248 aa9.29□□□□□ -0.92
SGCE-204ENST00000428696 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
SGCE-204ENST00000428696 A0A087WYN8 130 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 PLNP26678 52 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 S100A2P29034 98 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
SGCE-204ENST00000428696 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
SGCE-204ENST00000428696 FAM229AH3BQW9 127 aa9.27□□□□□ -0.93
SGCE-204ENST00000428696 IGKCP01834 107 aa9.27□□□□□ -0.93
SGCE-204ENST00000428696 CXCL5P42830 114 aa9.27□□□□□ -0.93
SGCE-204ENST00000428696 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
SGCE-204ENST00000428696 Q6ZRP5 223 aa9.26□□□□□ -0.93
SGCE-204ENST00000428696 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
SGCE-204ENST00000428696 HSPG2P98160 4391 aa9.26□□□□□ -0.93
SGCE-204ENST00000428696 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
SGCE-204ENST00000428696 XP32Q5T750 250 aa9.25□□□□□ -0.93
SGCE-204ENST00000428696 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 PFN2P35080 140 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 Q8N1X5 172 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 DNAH8Q96JB1 4490 aa9.24□□□□□ -0.93
SGCE-204ENST00000428696 HERVK_113P61574 105 aa9.23□□□□□ -0.93
SGCE-204ENST00000428696 CIRBPQ14011 172 aaKnown RBP9.23□□□□□ -0.93
SGCE-204ENST00000428696 PET117Q6UWS5 81 aa9.23□□□□□ -0.93
SGCE-204ENST00000428696 SNRPEP62304 92 aaKnown RBP9.22□□□□□ -0.93
SGCE-204ENST00000428696 KRTAP17-1Q9BYP8 105 aa9.22□□□□□ -0.93
SGCE-204ENST00000428696 KRTAP4-8Q9BYQ9 185 aa9.22□□□□□ -0.93
SGCE-204ENST00000428696 Q5VSD8 79 aa9.22□□□□□ -0.93
SGCE-204ENST00000428696 HIST3H2BBQ8N257 126 aa9.22□□□□□ -0.93
SGCE-204ENST00000428696 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
SGCE-204ENST00000428696 RYR1P21817 5038 aa9.21□□□□□ -0.93
SGCE-204ENST00000428696 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
SGCE-204ENST00000428696 A0A1W2PNN7 141 aa9.21□□□□□ -0.94
SGCE-204ENST00000428696 C20orf202A1L168 122 aa9.21□□□□□ -0.94
SGCE-204ENST00000428696 TLX1NBP0CAT3 122 aa9.21□□□□□ -0.94
SGCE-204ENST00000428696 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
SGCE-204ENST00000428696 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
SGCE-204ENST00000428696 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SGCE-204ENST00000428696 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
SGCE-204ENST00000428696 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
SGCE-204ENST00000428696 LEPROTO15243 131 aa9.19□□□□□ -0.94
SGCE-204ENST00000428696 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
SGCE-204ENST00000428696 LINC00158P58513 81 aa9.19□□□□□ -0.94
SGCE-204ENST00000428696 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
SGCE-204ENST00000428696 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
SGCE-204ENST00000428696 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
SGCE-204ENST00000428696 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
SGCE-204ENST00000428696 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
SGCE-204ENST00000428696 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
SGCE-204ENST00000428696 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
SGCE-204ENST00000428696 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
SGCE-204ENST00000428696 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
SGCE-204ENST00000428696 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
SGCE-204ENST00000428696 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
SGCE-204ENST00000428696 J3QQQ9 107 aa9.16□□□□□ -0.94
SGCE-204ENST00000428696 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
SGCE-204ENST00000428696 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
SGCE-204ENST00000428696 HERC2O95714 4834 aa9.16□□□□□ -0.94
SGCE-204ENST00000428696 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
SGCE-204ENST00000428696 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
SGCE-204ENST00000428696 SMIM13P0DJ93 91 aa9.14□□□□□ -0.95
SGCE-204ENST00000428696 HERV-K104P63124 156 aa9.14□□□□□ -0.95
SGCE-204ENST00000428696 C5orf52A6NGY3 159 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms