RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 MANBALQ9NQG1 85 aa6.38□□□□□ -1.39
DDX39B-208ENST00000428098 M0R378 163 aa6.37□□□□□ -1.39
DDX39B-208ENST00000428098 GIPP09681 153 aaPredicted RBP6.37□□□□□ -1.39
DDX39B-208ENST00000428098 Q8IZM0 81 aa6.37□□□□□ -1.39
DDX39B-208ENST00000428098 ALKBH7Q9BT30 221 aaPredicted RBP6.37□□□□□ -1.39
DDX39B-208ENST00000428098 A8MWL6 223 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 F8VRH5 84 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 GATCO43716 136 aaKnown RBP6.36□□□□□ -1.39
DDX39B-208ENST00000428098 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 Q6ZN92 141 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 S100ZQ8WXG8 99 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 HIGD2AQ9BW72 106 aa6.36□□□□□ -1.39
DDX39B-208ENST00000428098 IGLV4-3A0A075B6K6 122 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 ARPC5O15511 151 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 SLC25A20O43772 301 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 PDE6DO43924 150 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 PPP1R17O96001 155 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 CFC1P0CG37 223 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 LINC00299Q6ZSB3 139 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 NKAPP1Q8N9T2 125 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 GNB1LQ9BYB4 327 aa6.35□□□□□ -1.39
DDX39B-208ENST00000428098 PPP1R2P9O14990 202 aa6.34□□□□□ -1.39
DDX39B-208ENST00000428098 TCAPO15273 167 aa6.34□□□□□ -1.39
DDX39B-208ENST00000428098 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
DDX39B-208ENST00000428098 TRBV24-1A0A075B6N3 115 aa6.33□□□□□ -1.4
DDX39B-208ENST00000428098 RPS29P62273 56 aaKnown RBP6.33□□□□□ -1.4
DDX39B-208ENST00000428098 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
DDX39B-208ENST00000428098 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
DDX39B-208ENST00000428098 C20orf78Q9BR46 151 aa6.33□□□□□ -1.4
DDX39B-208ENST00000428098 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 HIGD1CA8MV81 97 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 RAB5BP61020 215 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 BORCS7Q96B45 105 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
DDX39B-208ENST00000428098 NEBP20929 6669 aa6.31□□□□□ -1.4
DDX39B-208ENST00000428098 EIF5A2Q9GZV4 153 aaKnown RBP6.31□□□□□ -1.4
DDX39B-208ENST00000428098 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
DDX39B-208ENST00000428098 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
DDX39B-208ENST00000428098 CDKN2A-AS1Q9UH64 79 aa6.3□□□□□ -1.4
DDX39B-208ENST00000428098 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
DDX39B-208ENST00000428098 CT83Q5H943 113 aa6.29□□□□□ -1.4
DDX39B-208ENST00000428098 FAM104BQ5XKR9 115 aa6.29□□□□□ -1.4
DDX39B-208ENST00000428098 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
DDX39B-208ENST00000428098 VPREB1P12018 145 aa6.28□□□□□ -1.4
DDX39B-208ENST00000428098 TEX43Q6ZNM6 134 aa6.28□□□□□ -1.4
DDX39B-208ENST00000428098 Q8NDZ9 215 aa6.28□□□□□ -1.4
DDX39B-208ENST00000428098 SMLR1H3BR10 107 aa6.27□□□□□ -1.41
DDX39B-208ENST00000428098 C2orf66Q6UXQ4 117 aa6.27□□□□□ -1.41
DDX39B-208ENST00000428098 AMELXQ99217 191 aa6.27□□□□□ -1.41
DDX39B-208ENST00000428098 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
DDX39B-208ENST00000428098 LINC00862A6NCI5 91 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 NPYP01303 97 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 CKS2P33552 79 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 RIGQ13278 110 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 MOBPQ13875 183 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
DDX39B-208ENST00000428098 IGLV9-49A0A0B4J1Y8 123 aa6.25□□□□□ -1.41
DDX39B-208ENST00000428098 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
DDX39B-208ENST00000428098 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
DDX39B-208ENST00000428098 GEMIN7Q9H840 131 aaKnown RBP6.25□□□□□ -1.41
DDX39B-208ENST00000428098 CXCL5P42830 114 aa6.24□□□□□ -1.41
DDX39B-208ENST00000428098 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
DDX39B-208ENST00000428098 VCX2Q9H322 139 aa6.24□□□□□ -1.41
DDX39B-208ENST00000428098 MT2AP02795 61 aa6.23□□□□□ -1.41
DDX39B-208ENST00000428098 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
DDX39B-208ENST00000428098 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
DDX39B-208ENST00000428098 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
DDX39B-208ENST00000428098 D6R8Y8 96 aa6.22□□□□□ -1.41
DDX39B-208ENST00000428098 ZNF345Q14585 488 aa6.22□□□□□ -1.41
DDX39B-208ENST00000428098 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
DDX39B-208ENST00000428098 COX7B2Q8TF08 81 aa6.22□□□□□ -1.41
DDX39B-208ENST00000428098 RAB5AP20339 215 aa6.21□□□□□ -1.42
DDX39B-208ENST00000428098 RAB14P61106 215 aa6.21□□□□□ -1.42
DDX39B-208ENST00000428098 Q6Q795 121 aa6.21□□□□□ -1.42
DDX39B-208ENST00000428098 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
DDX39B-208ENST00000428098 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
DDX39B-208ENST00000428098 PFN2P35080 140 aa6.2□□□□□ -1.42
DDX39B-208ENST00000428098 HERVK_113P63121 156 aa6.2□□□□□ -1.42
DDX39B-208ENST00000428098 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
DDX39B-208ENST00000428098 V9GYV3 84 aa6.2□□□□□ -1.42
DDX39B-208ENST00000428098 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
DDX39B-208ENST00000428098 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
DDX39B-208ENST00000428098 MT1FP04733 61 aa6.19□□□□□ -1.42
DDX39B-208ENST00000428098 OSTCQ9NRP0 149 aa6.19□□□□□ -1.42
DDX39B-208ENST00000428098 KANTRA0A1W2PQU2 76 aa6.18□□□□□ -1.42
DDX39B-208ENST00000428098 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
DDX39B-208ENST00000428098 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
DDX39B-208ENST00000428098 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
DDX39B-208ENST00000428098 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
DDX39B-208ENST00000428098 LOC389332A0A1B0GUA5 103 aa6.17□□□□□ -1.42
DDX39B-208ENST00000428098 NPSP0C0P6 89 aa6.17□□□□□ -1.42
DDX39B-208ENST00000428098 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
DDX39B-208ENST00000428098 GHRHP01286 108 aa6.16□□□□□ -1.42
DDX39B-208ENST00000428098 RGS21Q2M5E4 152 aa6.16□□□□□ -1.42
DDX39B-208ENST00000428098 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
DDX39B-208ENST00000428098 AKAP14Q86UN6 197 aa6.16□□□□□ -1.42
DDX39B-208ENST00000428098 TIMM17AQ99595 171 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms