RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 VCX2Q9H322 139 aa11.96□□□□□ -0.49
COL9A2-204ENST00000427563 LINC00474Q9P2X8 69 aa11.96□□□□□ -0.49
COL9A2-204ENST00000427563 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
COL9A2-204ENST00000427563 NDUFA6P56556 154 aa11.95□□□□□ -0.5
COL9A2-204ENST00000427563 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
COL9A2-204ENST00000427563 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
COL9A2-204ENST00000427563 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
COL9A2-204ENST00000427563 A0A087WZ39 114 aa11.94□□□□□ -0.5
COL9A2-204ENST00000427563 ATP5LO75964 103 aa11.94□□□□□ -0.5
COL9A2-204ENST00000427563 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
COL9A2-204ENST00000427563 C7orf33Q8WU49 177 aa11.94□□□□□ -0.5
COL9A2-204ENST00000427563 TNXBP22105 4242 aa11.93□□□□□ -0.5
COL9A2-204ENST00000427563 MT1HL1P0DM35 61 aa11.93□□□□□ -0.5
COL9A2-204ENST00000427563 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
COL9A2-204ENST00000427563 MRPL35Q9NZE8 188 aaKnown RBP11.93□□□□□ -0.5
COL9A2-204ENST00000427563 PKIGQ9Y2B9 76 aa11.93□□□□□ -0.5
COL9A2-204ENST00000427563 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
COL9A2-204ENST00000427563 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
COL9A2-204ENST00000427563 HMCN2Q8NDA2 5059 aa11.92□□□□□ -0.5
COL9A2-204ENST00000427563 PMVKQ15126 192 aa11.91□□□□□ -0.5
COL9A2-204ENST00000427563 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
COL9A2-204ENST00000427563 LEPROTL1O95214 131 aa11.9□□□□□ -0.5
COL9A2-204ENST00000427563 RPL18AQ02543 176 aaKnown RBP11.9□□□□□ -0.5
COL9A2-204ENST00000427563 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
COL9A2-204ENST00000427563 CST9LQ9H4G1 147 aa11.9□□□□□ -0.5
COL9A2-204ENST00000427563 F8WDY8 70 aa11.89□□□□□ -0.51
COL9A2-204ENST00000427563 NDUFA1O15239 70 aa11.89□□□□□ -0.51
COL9A2-204ENST00000427563 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
COL9A2-204ENST00000427563 Q6ZRP5 223 aa11.88□□□□□ -0.51
COL9A2-204ENST00000427563 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
COL9A2-204ENST00000427563 FABP4P15090 132 aa11.87□□□□□ -0.51
COL9A2-204ENST00000427563 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
COL9A2-204ENST00000427563 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
COL9A2-204ENST00000427563 C2orf82Q6UX34 121 aa11.86□□□□□ -0.51
COL9A2-204ENST00000427563 PACRGQ96M98 296 aaPredicted RBP11.86□□□□□ -0.51
COL9A2-204ENST00000427563 KRTAP7-1Q8IUC3 87 aa11.85□□□□□ -0.51
COL9A2-204ENST00000427563 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
COL9A2-204ENST00000427563 SEC11AP67812 179 aa11.84□□□□□ -0.51
COL9A2-204ENST00000427563 PHF5AQ7RTV0 110 aaKnown RBP11.84□□□□□ -0.51
COL9A2-204ENST00000427563 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
COL9A2-204ENST00000427563 TINCRA0A1B0GVN0 87 aa11.83□□□□□ -0.52
COL9A2-204ENST00000427563 S100A6P06703 90 aa11.83□□□□□ -0.52
COL9A2-204ENST00000427563 HERVK_113P63121 156 aa11.83□□□□□ -0.52
COL9A2-204ENST00000427563 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL9A2-204ENST00000427563 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
COL9A2-204ENST00000427563 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
COL9A2-204ENST00000427563 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
COL9A2-204ENST00000427563 KRTAP11-1Q8IUC1 163 aa11.82□□□□□ -0.52
COL9A2-204ENST00000427563 HIST3H2BBQ8N257 126 aa11.81□□□□□ -0.52
COL9A2-204ENST00000427563 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
COL9A2-204ENST00000427563 IGLV5-45A0A087WSX0 123 aa11.8□□□□□ -0.52
COL9A2-204ENST00000427563 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
COL9A2-204ENST00000427563 PSORS1C2Q9UIG4 136 aa11.8□□□□□ -0.52
COL9A2-204ENST00000427563 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 F8VRH5 84 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 H0Y8G0 127 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 ODF1Q14990 250 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
COL9A2-204ENST00000427563 C11orf86A6NJI1 115 aa11.78□□□□□ -0.52
COL9A2-204ENST00000427563 SNRPEP62304 92 aaKnown RBP11.78□□□□□ -0.52
COL9A2-204ENST00000427563 Q8IZM0 81 aa11.78□□□□□ -0.52
COL9A2-204ENST00000427563 TOMM7Q9P0U1 55 aa11.78□□□□□ -0.52
COL9A2-204ENST00000427563 C5orf52A6NGY3 159 aa11.77□□□□□ -0.53
COL9A2-204ENST00000427563 C9orf129Q5T035 196 aaKnown RBP11.77□□□□□ -0.53
COL9A2-204ENST00000427563 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
COL9A2-204ENST00000427563 SPINK6Q6UWN8 80 aa11.77□□□□□ -0.53
COL9A2-204ENST00000427563 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
COL9A2-204ENST00000427563 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
COL9A2-204ENST00000427563 ZNF22P17026 224 aaPredicted RBP11.76□□□□□ -0.53
COL9A2-204ENST00000427563 S100A2P29034 98 aa11.76□□□□□ -0.53
COL9A2-204ENST00000427563 FAM19A5Q7Z5A7 132 aaPredicted RBP11.76□□□□□ -0.53
COL9A2-204ENST00000427563 HIST1H2BLQ99880 126 aa11.76□□□□□ -0.53
COL9A2-204ENST00000427563 UBR4Q5T4S7 5183 aa11.76□□□□□ -0.53
COL9A2-204ENST00000427563 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
COL9A2-204ENST00000427563 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
COL9A2-204ENST00000427563 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
COL9A2-204ENST00000427563 PRSS2P07478 247 aa11.74□□□□□ -0.53
COL9A2-204ENST00000427563 H3BRM9 83 aa11.73□□□□□ -0.53
COL9A2-204ENST00000427563 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
COL9A2-204ENST00000427563 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
COL9A2-204ENST00000427563 PMCHL2Q9BQD1 86 aa11.73□□□□□ -0.53
COL9A2-204ENST00000427563 SPINK8P0C7L1 97 aa11.72□□□□□ -0.53
COL9A2-204ENST00000427563 KRTDAPP60985 99 aa11.72□□□□□ -0.53
COL9A2-204ENST00000427563 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
COL9A2-204ENST00000427563 LINC01545Q5VT33 79 aa11.72□□□□□ -0.53
COL9A2-204ENST00000427563 TMA7Q9Y2S6 64 aaKnown RBP11.72□□□□□ -0.53
COL9A2-204ENST00000427563 DPM2O94777 84 aa11.71□□□□□ -0.53
COL9A2-204ENST00000427563 KRTAP10-8P60410 259 aa11.71□□□□□ -0.53
COL9A2-204ENST00000427563 CKS1BP61024 79 aa11.71□□□□□ -0.53
COL9A2-204ENST00000427563 C1orf137Q5JT78 98 aa11.71□□□□□ -0.53
COL9A2-204ENST00000427563 PLNP26678 52 aa11.7□□□□□ -0.54
COL9A2-204ENST00000427563 M0QXV9 152 aa11.69□□□□□ -0.54
COL9A2-204ENST00000427563 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
COL9A2-204ENST00000427563 IGKCP01834 107 aa11.68□□□□□ -0.54
COL9A2-204ENST00000427563 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
COL9A2-204ENST00000427563 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
COL9A2-204ENST00000427563 IGLV7-43P04211 117 aa11.67□□□□□ -0.54
COL9A2-204ENST00000427563 XAGE1AQ9HD64 81 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms