RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 DPM2O94777 84 aa10.15□□□□□ -0.78
COL11A1-204ENST00000427239 LINC01545Q5VT33 79 aa10.15□□□□□ -0.78
COL11A1-204ENST00000427239 IGHV3-64A0A075B6Q5 118 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 IGKCP01834 107 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
COL11A1-204ENST00000427239 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 WFDC2Q14508 124 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 Q8N814 137 aa10.13□□□□□ -0.79
COL11A1-204ENST00000427239 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
COL11A1-204ENST00000427239 ZNF561-AS1K7EIQ3 104 aa10.12□□□□□ -0.79
COL11A1-204ENST00000427239 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
COL11A1-204ENST00000427239 hDV102S1A0JD36 115 aa10.11□□□□□ -0.79
COL11A1-204ENST00000427239 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
COL11A1-204ENST00000427239 GTF2H5Q6ZYL4 71 aa10.1□□□□□ -0.79
COL11A1-204ENST00000427239 TMEM223A0PJW6 202 aa10.09□□□□□ -0.79
COL11A1-204ENST00000427239 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
COL11A1-204ENST00000427239 COX8AP10176 69 aa10.09□□□□□ -0.79
COL11A1-204ENST00000427239 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
COL11A1-204ENST00000427239 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
COL11A1-204ENST00000427239 F8WDY8 70 aa10.08□□□□□ -0.8
COL11A1-204ENST00000427239 PRSS2P07478 247 aa10.08□□□□□ -0.8
COL11A1-204ENST00000427239 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
COL11A1-204ENST00000427239 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
COL11A1-204ENST00000427239 Q8IZM0 81 aa10.08□□□□□ -0.8
COL11A1-204ENST00000427239 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
COL11A1-204ENST00000427239 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
COL11A1-204ENST00000427239 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
COL11A1-204ENST00000427239 C2orf48Q96LS8 159 aa10.07□□□□□ -0.8
COL11A1-204ENST00000427239 A6NDN8 102 aa10.07□□□□□ -0.8
COL11A1-204ENST00000427239 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
COL11A1-204ENST00000427239 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
COL11A1-204ENST00000427239 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.06□□□□□ -0.8
COL11A1-204ENST00000427239 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
COL11A1-204ENST00000427239 HERVK_113P61574 105 aa10.06□□□□□ -0.8
COL11A1-204ENST00000427239 TOMM7Q9P0U1 55 aa10.06□□□□□ -0.8
COL11A1-204ENST00000427239 PKD1P98161 4303 aa10.06□□□□□ -0.8
COL11A1-204ENST00000427239 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
COL11A1-204ENST00000427239 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
COL11A1-204ENST00000427239 CKS1BP61024 79 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 TMEM238C9JI98 176 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 SLPIP03973 132 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
COL11A1-204ENST00000427239 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
COL11A1-204ENST00000427239 NDUFA1O15239 70 aa10.03□□□□□ -0.8
COL11A1-204ENST00000427239 CXCL5P42830 114 aa10.03□□□□□ -0.8
COL11A1-204ENST00000427239 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
COL11A1-204ENST00000427239 IGLV5-52A0A0A0MRZ9 124 aa10.02□□□□□ -0.8
COL11A1-204ENST00000427239 K7EP34 96 aa10.02□□□□□ -0.8
COL11A1-204ENST00000427239 KRTAP10-2P60368 255 aa10.02□□□□□ -0.8
COL11A1-204ENST00000427239 HSD52Q0P140 79 aa10.02□□□□□ -0.8
COL11A1-204ENST00000427239 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
COL11A1-204ENST00000427239 LEPROTO15243 131 aa10.02□□□□□ -0.81
COL11A1-204ENST00000427239 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
COL11A1-204ENST00000427239 PLEKHB2Q96CS7 222 aa10.02□□□□□ -0.81
COL11A1-204ENST00000427239 E9PLD3 99 aa10.01□□□□□ -0.81
COL11A1-204ENST00000427239 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
COL11A1-204ENST00000427239 CARD19Q96LW7 228 aa10.01□□□□□ -0.81
COL11A1-204ENST00000427239 C2orf82Q6UX34 121 aa10□□□□□ -0.81
COL11A1-204ENST00000427239 Q6ZRU5 148 aa10□□□□□ -0.81
COL11A1-204ENST00000427239 UNQ6190/PRO20217Q6UXQ8 127 aa9.99□□□□□ -0.81
COL11A1-204ENST00000427239 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
COL11A1-204ENST00000427239 J3QQQ9 107 aa9.99□□□□□ -0.81
COL11A1-204ENST00000427239 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
COL11A1-204ENST00000427239 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
COL11A1-204ENST00000427239 NMUP48645 174 aa9.97□□□□□ -0.81
COL11A1-204ENST00000427239 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
COL11A1-204ENST00000427239 H3BUT2 72 aa9.96□□□□□ -0.81
COL11A1-204ENST00000427239 SCGB1A1P11684 91 aa9.96□□□□□ -0.81
COL11A1-204ENST00000427239 LGALS3P17931 250 aaKnown RBP9.96□□□□□ -0.81
COL11A1-204ENST00000427239 GCSHP23434 173 aa9.96□□□□□ -0.81
COL11A1-204ENST00000427239 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.81
COL11A1-204ENST00000427239 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.81
COL11A1-204ENST00000427239 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
COL11A1-204ENST00000427239 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
COL11A1-204ENST00000427239 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
COL11A1-204ENST00000427239 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
COL11A1-204ENST00000427239 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
COL11A1-204ENST00000427239 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
COL11A1-204ENST00000427239 HERV-K104P63124 156 aa9.94□□□□□ -0.82
COL11A1-204ENST00000427239 SDIM1Q6ZPB5 146 aa9.94□□□□□ -0.82
COL11A1-204ENST00000427239 SPCS1Q9Y6A9 102 aa9.94□□□□□ -0.82
COL11A1-204ENST00000427239 IGKV2D-26A0A0A0MRZ7 120 aa9.93□□□□□ -0.82
COL11A1-204ENST00000427239 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
COL11A1-204ENST00000427239 FABP2P12104 132 aa9.93□□□□□ -0.82
COL11A1-204ENST00000427239 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
COL11A1-204ENST00000427239 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
COL11A1-204ENST00000427239 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
COL11A1-204ENST00000427239 COX17Q14061 63 aa9.92□□□□□ -0.82
COL11A1-204ENST00000427239 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
COL11A1-204ENST00000427239 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
COL11A1-204ENST00000427239 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
COL11A1-204ENST00000427239 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
COL11A1-204ENST00000427239 DNAH5Q8TE73 4624 aa9.9□□□□□ -0.82
COL11A1-204ENST00000427239 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.83
COL11A1-204ENST00000427239 ERG28Q9UKR5 140 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms