RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 Q8IZM0 81 aa13.27□□□□□ -0.29
SNX17-202ENST00000427123 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
SNX17-202ENST00000427123 C6orf226Q5I0X4 101 aa13.26□□□□□ -0.29
SNX17-202ENST00000427123 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
SNX17-202ENST00000427123 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
SNX17-202ENST00000427123 MRPL23Q16540 153 aaKnown RBP13.25□□□□□ -0.29
SNX17-202ENST00000427123 CCL18P55774 89 aa13.23□□□□□ -0.29
SNX17-202ENST00000427123 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
SNX17-202ENST00000427123 IGKV2-28A0A075B6P5 120 aa13.23□□□□□ -0.29
SNX17-202ENST00000427123 IGKV2D-28P01615 120 aa13.23□□□□□ -0.29
SNX17-202ENST00000427123 PFN2P35080 140 aa13.23□□□□□ -0.29
SNX17-202ENST00000427123 C11orf68Q9H3H3 251 aaKnown RBP13.23□□□□□ -0.29
SNX17-202ENST00000427123 TEX49A0A1B0GTD5 131 aa13.22□□□□□ -0.29
SNX17-202ENST00000427123 ANGP03950 147 aaKnown RBP13.22□□□□□ -0.29
SNX17-202ENST00000427123 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
SNX17-202ENST00000427123 HTN3P15516 51 aa13.22□□□□□ -0.29
SNX17-202ENST00000427123 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
SNX17-202ENST00000427123 REG3AQ06141 175 aa13.22□□□□□ -0.29
SNX17-202ENST00000427123 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
SNX17-202ENST00000427123 FLNBO75369 2602 aaKnown RBP13.21□□□□□ -0.29
SNX17-202ENST00000427123 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.29
SNX17-202ENST00000427123 TRACP01848 142 aa13.2□□□□□ -0.3
SNX17-202ENST00000427123 LELP1Q5T871 98 aa13.2□□□□□ -0.3
SNX17-202ENST00000427123 Q8N3U1 123 aa13.2□□□□□ -0.3
SNX17-202ENST00000427123 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
SNX17-202ENST00000427123 CXCL5P42830 114 aa13.18□□□□□ -0.3
SNX17-202ENST00000427123 ATRQ13535 2644 aa13.18□□□□□ -0.3
SNX17-202ENST00000427123 XGP55808 180 aa13.18□□□□□ -0.3
SNX17-202ENST00000427123 CKS1BP61024 79 aa13.18□□□□□ -0.3
SNX17-202ENST00000427123 CFAP161Q6P656 301 aa13.17□□□□□ -0.3
SNX17-202ENST00000427123 KIAA0087Q14695 138 aa13.17□□□□□ -0.3
SNX17-202ENST00000427123 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
SNX17-202ENST00000427123 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
SNX17-202ENST00000427123 MALP21145 153 aa13.16□□□□□ -0.3
SNX17-202ENST00000427123 MT-ATP8P03928 68 aa13.15□□□□□ -0.3
SNX17-202ENST00000427123 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
SNX17-202ENST00000427123 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.3
SNX17-202ENST00000427123 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.3
SNX17-202ENST00000427123 SMIM11BQ8TCY0 68 aa13.14□□□□□ -0.31
SNX17-202ENST00000427123 KRTAP10-11P60412 298 aa13.13□□□□□ -0.31
SNX17-202ENST00000427123 COX17Q14061 63 aa13.13□□□□□ -0.31
SNX17-202ENST00000427123 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
SNX17-202ENST00000427123 EGFEM1PQ0D2K5 195 aa13.11□□□□□ -0.31
SNX17-202ENST00000427123 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
SNX17-202ENST00000427123 H0YGX0 51 aa13.1□□□□□ -0.31
SNX17-202ENST00000427123 RETNQ9HD89 108 aa13.1□□□□□ -0.31
SNX17-202ENST00000427123 FAM240AA0A1B0GVK7 77 aa13.09□□□□□ -0.31
SNX17-202ENST00000427123 H3BNG1 76 aa13.09□□□□□ -0.31
SNX17-202ENST00000427123 LYPD5Q6UWN5 251 aa13.09□□□□□ -0.31
SNX17-202ENST00000427123 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
SNX17-202ENST00000427123 BAALC-AS2P0C853 105 aa13.08□□□□□ -0.31
SNX17-202ENST00000427123 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.31
SNX17-202ENST00000427123 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
SNX17-202ENST00000427123 TRRAPQ9Y4A5 3859 aa13.07□□□□□ -0.32
SNX17-202ENST00000427123 NDUFC2O95298 119 aa13.06□□□□□ -0.32
SNX17-202ENST00000427123 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
SNX17-202ENST00000427123 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
SNX17-202ENST00000427123 DNAL4O96015 105 aa13.05□□□□□ -0.32
SNX17-202ENST00000427123 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
SNX17-202ENST00000427123 A0A087WYN8 130 aa13.04□□□□□ -0.32
SNX17-202ENST00000427123 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
SNX17-202ENST00000427123 Q9HAA7 133 aa13.04□□□□□ -0.32
SNX17-202ENST00000427123 F8P00451 2351 aa13.04□□□□□ -0.32
SNX17-202ENST00000427123 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
SNX17-202ENST00000427123 SNCGO76070 127 aa13.03□□□□□ -0.32
SNX17-202ENST00000427123 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
SNX17-202ENST00000427123 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
SNX17-202ENST00000427123 Q6ZTC4 211 aa13.01□□□□□ -0.33
SNX17-202ENST00000427123 A0A0J9YWU9 116 aa13□□□□□ -0.33
SNX17-202ENST00000427123 ACYP1P07311 99 aa13□□□□□ -0.33
SNX17-202ENST00000427123 UNQ6190/PRO20217Q6UXQ8 127 aa13□□□□□ -0.33
SNX17-202ENST00000427123 C6orf223Q8N319 242 aa13□□□□□ -0.33
SNX17-202ENST00000427123 C15orf53Q8NAA6 179 aa13□□□□□ -0.33
SNX17-202ENST00000427123 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
SNX17-202ENST00000427123 LECT2O14960 151 aa12.98□□□□□ -0.33
SNX17-202ENST00000427123 INAFM2P0DMQ5 153 aa12.98□□□□□ -0.33
SNX17-202ENST00000427123 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
SNX17-202ENST00000427123 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
SNX17-202ENST00000427123 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
SNX17-202ENST00000427123 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
SNX17-202ENST00000427123 PRR3P79522 188 aaKnown RBP12.98□□□□□ -0.33
SNX17-202ENST00000427123 A0A1B0GV72 72 aa12.97□□□□□ -0.33
SNX17-202ENST00000427123 GVQW2A0A096LPI5 108 aaPredicted RBP12.96□□□□□ -0.33
SNX17-202ENST00000427123 LINC00526Q96FQ7 95 aa12.95□□□□□ -0.34
SNX17-202ENST00000427123 A0A1B0GX51 115 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 NCR3O14931 201 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 Q6Q795 121 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
SNX17-202ENST00000427123 Q8NDZ9 215 aa12.93□□□□□ -0.34
SNX17-202ENST00000427123 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
SNX17-202ENST00000427123 ESRGQ1W209 222 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 C11orf45Q8TAV5 145 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 S100A7L2Q5SY68 101 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 ORMDL1Q9P0S3 153 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
SNX17-202ENST00000427123 CMYA5Q8N3K9 4069 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms