RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
LMCD1-204ENST00000426878 Q6ZRP5 223 aa10.78□□□□□ -0.68
LMCD1-204ENST00000426878 A0A1W2PNN7 141 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.68
LMCD1-204ENST00000426878 CKS1BP61024 79 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.68
LMCD1-204ENST00000426878 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 LRP1Q07954 4544 aaKnown RBP10.77□□□□□ -0.69
LMCD1-204ENST00000426878 SMIM1B2RUZ4 78 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 ATP5LO75964 103 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
LMCD1-204ENST00000426878 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 HERC1Q15751 4861 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 CXCL5P42830 114 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 OXTP01178 125 aa10.74□□□□□ -0.69
LMCD1-204ENST00000426878 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
LMCD1-204ENST00000426878 F8VRH5 84 aa10.73□□□□□ -0.69
LMCD1-204ENST00000426878 TRGC2P03986 189 aa10.73□□□□□ -0.69
LMCD1-204ENST00000426878 COLCA2A8K830 154 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 H3BRM9 83 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 NDUFA6P56556 154 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 COX7B2Q8TF08 81 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 J3QL48 77 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
LMCD1-204ENST00000426878 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
LMCD1-204ENST00000426878 IGLV5-39A0A0G2JS06 123 aa10.68□□□□□ -0.7
LMCD1-204ENST00000426878 FAM168BA1KXE4 195 aa10.68□□□□□ -0.7
LMCD1-204ENST00000426878 ZNF22P17026 224 aaPredicted RBP10.68□□□□□ -0.7
LMCD1-204ENST00000426878 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 HSBP1O75506 76 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
LMCD1-204ENST00000426878 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
LMCD1-204ENST00000426878 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
LMCD1-204ENST00000426878 ODF1Q14990 250 aa10.66□□□□□ -0.7
LMCD1-204ENST00000426878 FAM19A5Q7Z5A7 132 aaPredicted RBP10.65□□□□□ -0.7
LMCD1-204ENST00000426878 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
LMCD1-204ENST00000426878 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
LMCD1-204ENST00000426878 LINC00310P59036 64 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 PSORS1C2Q9UIG4 136 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SERF1AO75920 110 aa10.63□□□□□ -0.71
LMCD1-204ENST00000426878 M0QXV9 152 aa10.62□□□□□ -0.71
LMCD1-204ENST00000426878 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
LMCD1-204ENST00000426878 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
LMCD1-204ENST00000426878 SCO1O75880 301 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 KRTAP11-1Q8IUC1 163 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 NUPR1O60356 82 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 PLA2G2DQ9UNK4 145 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 TMEM223A0PJW6 202 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 C1orf137Q5JT78 98 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 C22orf24Q9Y442 160 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 MT1HL1P0DM35 61 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 COX17Q14061 63 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 UBE2BP63146 152 aa10.56□□□□□ -0.72
LMCD1-204ENST00000426878 LBHQ53QV2 105 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-204ENST00000426878 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-204ENST00000426878 TNXBP22105 4242 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BKO60814 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BJP06899 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BOP23527 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BBP33778 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BDP58876 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BCP62807 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST2H2BEQ16778 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BHQ93079 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BNQ99877 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BMQ99879 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
LMCD1-204ENST00000426878 PFN2P35080 140 aa10.53□□□□□ -0.72
LMCD1-204ENST00000426878 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
LMCD1-204ENST00000426878 H0Y8G0 127 aa10.51□□□□□ -0.73
LMCD1-204ENST00000426878 FABP4P15090 132 aa10.51□□□□□ -0.73
LMCD1-204ENST00000426878 PLNP26678 52 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 DPM2O94777 84 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 LINC00167Q96N53 147 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 HERV-K104P63124 156 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 H0Y9J4 135 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms