RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 Q8IZM0 81 aa9.47□□□□□ -0.89
TMEM248-204ENST00000424964 HSPG2P98160 4391 aa9.47□□□□□ -0.89
TMEM248-204ENST00000424964 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
TMEM248-204ENST00000424964 ZNF22P17026 224 aaPredicted RBP9.46□□□□□ -0.9
TMEM248-204ENST00000424964 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
TMEM248-204ENST00000424964 MAJINQ3KP22 176 aa9.46□□□□□ -0.9
TMEM248-204ENST00000424964 Q8N1X5 172 aa9.46□□□□□ -0.9
TMEM248-204ENST00000424964 A0A096LNI7 61 aa9.45□□□□□ -0.9
TMEM248-204ENST00000424964 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
TMEM248-204ENST00000424964 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
TMEM248-204ENST00000424964 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
TMEM248-204ENST00000424964 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
TMEM248-204ENST00000424964 F8VRH5 84 aa9.44□□□□□ -0.9
TMEM248-204ENST00000424964 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
TMEM248-204ENST00000424964 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
TMEM248-204ENST00000424964 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
TMEM248-204ENST00000424964 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
TMEM248-204ENST00000424964 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
TMEM248-204ENST00000424964 RYR1P21817 5038 aa9.43□□□□□ -0.9
TMEM248-204ENST00000424964 A0A087WYN8 130 aa9.43□□□□□ -0.9
TMEM248-204ENST00000424964 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
TMEM248-204ENST00000424964 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
TMEM248-204ENST00000424964 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
TMEM248-204ENST00000424964 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
TMEM248-204ENST00000424964 STPG4Q8N801 248 aa9.42□□□□□ -0.9
TMEM248-204ENST00000424964 MAP1LC3CQ9BXW4 147 aa9.42□□□□□ -0.9
TMEM248-204ENST00000424964 CXCL5P42830 114 aa9.41□□□□□ -0.9
TMEM248-204ENST00000424964 ODF1Q14990 250 aa9.41□□□□□ -0.9
TMEM248-204ENST00000424964 C9orf116Q5BN46 136 aaPredicted RBP9.41□□□□□ -0.9
TMEM248-204ENST00000424964 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
TMEM248-204ENST00000424964 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
TMEM248-204ENST00000424964 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.9
TMEM248-204ENST00000424964 Q5VSD8 79 aa9.4□□□□□ -0.9
TMEM248-204ENST00000424964 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 HERC2O95714 4834 aa9.39□□□□□ -0.91
TMEM248-204ENST00000424964 TMEM223A0PJW6 202 aa9.38□□□□□ -0.91
TMEM248-204ENST00000424964 Q6ZRP5 223 aa9.38□□□□□ -0.91
TMEM248-204ENST00000424964 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
TMEM248-204ENST00000424964 NDUFC2-KCTD14E9PQ53 114 aa9.37□□□□□ -0.91
TMEM248-204ENST00000424964 PLNP26678 52 aa9.37□□□□□ -0.91
TMEM248-204ENST00000424964 DPM2O94777 84 aa9.36□□□□□ -0.91
TMEM248-204ENST00000424964 SYS1-DBNDD2H3BUS1 97 aa9.35□□□□□ -0.91
TMEM248-204ENST00000424964 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
TMEM248-204ENST00000424964 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
TMEM248-204ENST00000424964 IGKCP01834 107 aa9.34□□□□□ -0.91
TMEM248-204ENST00000424964 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
TMEM248-204ENST00000424964 S100A6P06703 90 aa9.32□□□□□ -0.92
TMEM248-204ENST00000424964 KRTDAPP60985 99 aa9.32□□□□□ -0.92
TMEM248-204ENST00000424964 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
TMEM248-204ENST00000424964 SFTA2Q6UW10 78 aa9.32□□□□□ -0.92
TMEM248-204ENST00000424964 PET117Q6UWS5 81 aa9.32□□□□□ -0.92
TMEM248-204ENST00000424964 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
TMEM248-204ENST00000424964 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
TMEM248-204ENST00000424964 HERVK_113P61574 105 aa9.31□□□□□ -0.92
TMEM248-204ENST00000424964 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
TMEM248-204ENST00000424964 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
TMEM248-204ENST00000424964 S100A2P29034 98 aa9.3□□□□□ -0.92
TMEM248-204ENST00000424964 PFN2P35080 140 aa9.3□□□□□ -0.92
TMEM248-204ENST00000424964 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
TMEM248-204ENST00000424964 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
TMEM248-204ENST00000424964 FAM19A5Q7Z5A7 132 aaPredicted RBP9.3□□□□□ -0.92
TMEM248-204ENST00000424964 FAT1Q14517 4588 aa9.29□□□□□ -0.92
TMEM248-204ENST00000424964 LEPROTO15243 131 aa9.29□□□□□ -0.92
TMEM248-204ENST00000424964 PLEKHB2Q96CS7 222 aa9.29□□□□□ -0.92
TMEM248-204ENST00000424964 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
TMEM248-204ENST00000424964 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
TMEM248-204ENST00000424964 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
TMEM248-204ENST00000424964 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
TMEM248-204ENST00000424964 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.93
TMEM248-204ENST00000424964 MYMXA0A1B0GTQ4 84 aa9.26□□□□□ -0.93
TMEM248-204ENST00000424964 C20orf202A1L168 122 aa9.26□□□□□ -0.93
TMEM248-204ENST00000424964 COX17Q14061 63 aa9.26□□□□□ -0.93
TMEM248-204ENST00000424964 J3QQQ9 107 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 M0QXV9 152 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
TMEM248-204ENST00000424964 LINC00158P58513 81 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 HERV-K104P63124 156 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
TMEM248-204ENST00000424964 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
TMEM248-204ENST00000424964 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
TMEM248-204ENST00000424964 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
TMEM248-204ENST00000424964 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
TMEM248-204ENST00000424964 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
TMEM248-204ENST00000424964 HIST1H2BLQ99880 126 aa9.24□□□□□ -0.93
TMEM248-204ENST00000424964 E9PLD3 99 aa9.23□□□□□ -0.93
TMEM248-204ENST00000424964 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
TMEM248-204ENST00000424964 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
TMEM248-204ENST00000424964 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
TMEM248-204ENST00000424964 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
TMEM248-204ENST00000424964 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
TMEM248-204ENST00000424964 NMUP48645 174 aa9.21□□□□□ -0.94
TMEM248-204ENST00000424964 UBE2BP63146 152 aa9.21□□□□□ -0.94
TMEM248-204ENST00000424964 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
TMEM248-204ENST00000424964 LBHQ53QV2 105 aaPredicted RBP9.2□□□□□ -0.94
TMEM248-204ENST00000424964 ATOH7Q8N100 152 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms