RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 PMCHL1Q16048 86 aa11.74□□□□□ -0.53
PRNP-202ENST00000424424 CHCHD1Q96BP2 118 aaKnown RBP11.73□□□□□ -0.53
PRNP-202ENST00000424424 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
PRNP-202ENST00000424424 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
PRNP-202ENST00000424424 PDZD11Q5EBL8 140 aa11.72□□□□□ -0.53
PRNP-202ENST00000424424 MYCBP2O75592 4640 aa11.72□□□□□ -0.53
PRNP-202ENST00000424424 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.53
PRNP-202ENST00000424424 H3BRM9 83 aa11.71□□□□□ -0.53
PRNP-202ENST00000424424 CXCL5P42830 114 aa11.71□□□□□ -0.53
PRNP-202ENST00000424424 Q6ZRP5 223 aa11.71□□□□□ -0.53
PRNP-202ENST00000424424 DMBT1Q9UGM3 2413 aaPredicted RBP11.71□□□□□ -0.54
PRNP-202ENST00000424424 A0A1W2PNN7 141 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 J3QL48 77 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 TRGC2P03986 189 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
PRNP-202ENST00000424424 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
PRNP-202ENST00000424424 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
PRNP-202ENST00000424424 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
PRNP-202ENST00000424424 F8VRH5 84 aa11.68□□□□□ -0.54
PRNP-202ENST00000424424 IGLC3P0DOY3 106 aa11.68□□□□□ -0.54
PRNP-202ENST00000424424 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
PRNP-202ENST00000424424 HSBP1O75506 76 aa11.67□□□□□ -0.54
PRNP-202ENST00000424424 SPINK8P0C7L1 97 aa11.67□□□□□ -0.54
PRNP-202ENST00000424424 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
PRNP-202ENST00000424424 OXTP01178 125 aa11.66□□□□□ -0.54
PRNP-202ENST00000424424 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
PRNP-202ENST00000424424 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
PRNP-202ENST00000424424 COLCA2A8K830 154 aa11.63□□□□□ -0.55
PRNP-202ENST00000424424 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
PRNP-202ENST00000424424 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
PRNP-202ENST00000424424 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
PRNP-202ENST00000424424 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
PRNP-202ENST00000424424 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
PRNP-202ENST00000424424 TMEM170BQ5T4T1 132 aa11.61□□□□□ -0.55
PRNP-202ENST00000424424 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
PRNP-202ENST00000424424 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
PRNP-202ENST00000424424 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
PRNP-202ENST00000424424 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
PRNP-202ENST00000424424 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
PRNP-202ENST00000424424 SERF1AO75920 110 aa11.58□□□□□ -0.56
PRNP-202ENST00000424424 M0QXV9 152 aa11.57□□□□□ -0.56
PRNP-202ENST00000424424 SPINK6Q6UWN8 80 aa11.57□□□□□ -0.56
PRNP-202ENST00000424424 XAGE1AQ9HD64 81 aa11.57□□□□□ -0.56
PRNP-202ENST00000424424 PSORS1C2Q9UIG4 136 aa11.57□□□□□ -0.56
PRNP-202ENST00000424424 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
PRNP-202ENST00000424424 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
PRNP-202ENST00000424424 UBE2BP63146 152 aa11.55□□□□□ -0.56
PRNP-202ENST00000424424 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
PRNP-202ENST00000424424 SCO1O75880 301 aa11.54□□□□□ -0.56
PRNP-202ENST00000424424 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
PRNP-202ENST00000424424 LINC00310P59036 64 aa11.53□□□□□ -0.56
PRNP-202ENST00000424424 KRTAP7-1Q8IUC3 87 aa11.53□□□□□ -0.56
PRNP-202ENST00000424424 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
PRNP-202ENST00000424424 H0Y8G0 127 aa11.52□□□□□ -0.57
PRNP-202ENST00000424424 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
PRNP-202ENST00000424424 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
PRNP-202ENST00000424424 LBHQ53QV2 105 aaPredicted RBP11.51□□□□□ -0.57
PRNP-202ENST00000424424 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
PRNP-202ENST00000424424 REG3GQ6UW15 175 aa11.51□□□□□ -0.57
PRNP-202ENST00000424424 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
PRNP-202ENST00000424424 NUPR1O60356 82 aa11.5□□□□□ -0.57
PRNP-202ENST00000424424 FABP4P15090 132 aa11.5□□□□□ -0.57
PRNP-202ENST00000424424 PFN2P35080 140 aa11.5□□□□□ -0.57
PRNP-202ENST00000424424 COX17Q14061 63 aa11.5□□□□□ -0.57
PRNP-202ENST00000424424 ODF1Q14990 250 aa11.49□□□□□ -0.57
PRNP-202ENST00000424424 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
PRNP-202ENST00000424424 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
PRNP-202ENST00000424424 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
PRNP-202ENST00000424424 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
PRNP-202ENST00000424424 IGLV7-43P04211 117 aa11.47□□□□□ -0.57
PRNP-202ENST00000424424 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
PRNP-202ENST00000424424 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
PRNP-202ENST00000424424 PLNP26678 52 aa11.45□□□□□ -0.58
PRNP-202ENST00000424424 MAP1LC3CQ9BXW4 147 aa11.45□□□□□ -0.58
PRNP-202ENST00000424424 NKAPP1Q8N9T2 125 aa11.44□□□□□ -0.58
PRNP-202ENST00000424424 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
PRNP-202ENST00000424424 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
PRNP-202ENST00000424424 DIRC1Q969H9 104 aa11.43□□□□□ -0.58
PRNP-202ENST00000424424 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
PRNP-202ENST00000424424 DPM2O94777 84 aa11.42□□□□□ -0.58
PRNP-202ENST00000424424 LINC00158P58513 81 aa11.42□□□□□ -0.58
PRNP-202ENST00000424424 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
PRNP-202ENST00000424424 IGLV5-37A0A075B6J1 123 aa11.41□□□□□ -0.58
PRNP-202ENST00000424424 MT1HL1P0DM35 61 aa11.41□□□□□ -0.58
PRNP-202ENST00000424424 HERV-K104P63124 156 aa11.41□□□□□ -0.58
PRNP-202ENST00000424424 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
PRNP-202ENST00000424424 LINC00587B1AMM8 73 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms