RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 LINC00269Q8N2A0 174 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 C6orf223Q8N319 242 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 MAPKAPK5-AS1Q8N8E1 139 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 DEFB104AQ8WTQ1 72 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 BAALCQ8WXS3 180 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 UBE2WQ96B02 151 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
EPHA4-206ENST00000424339 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
EPHA4-206ENST00000424339 IGLV4-3A0A075B6K6 122 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 A0A1W2PPM0 123 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 E9PLD3 99 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 SS18Q15532 418 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 GTF2H5Q6ZYL4 71 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 CEND1Q8N111 149 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 VCX2Q9H322 139 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 CST9LQ9H4G1 147 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
EPHA4-206ENST00000424339 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 H3BUT2 72 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 M0R2N4 97 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 PSCAO43653 123 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 SMIM13P0DJ93 91 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 ENHOQ6UWT2 76 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 Q6ZUT4 128 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 AMELXQ99217 191 aa4.7□□□□□ -1.66
EPHA4-206ENST00000424339 IGKV2D-24A0A075B6R9 120 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 MYMXA0A1B0GTQ4 84 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 LINC00959A0A1B0GUT2 108 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-206ENST00000424339 PMVKQ15126 192 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 C14orf177Q52M58 125 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 Q9HAA7 133 aa4.69□□□□□ -1.66
EPHA4-206ENST00000424339 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 C11orf86A6NJI1 115 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 K7ERJ3 54 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 FABP2P12104 132 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 HERVK_113P63121 156 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 CLPSL2Q6UWE3 100 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-206ENST00000424339 FAM19A3Q7Z5A8 133 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 CHCHD10Q8WYQ3 142 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-206ENST00000424339 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 NAA38Q9BRA0 125 aaKnown RBP4.68□□□□□ -1.66
EPHA4-206ENST00000424339 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
EPHA4-206ENST00000424339 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
EPHA4-206ENST00000424339 TRAV13-1A0A0B4J241 112 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 IGKV3OR2-268A0A0C4DH90 116 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 UBE2D1P51668 147 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 FAM104AQ969W3 186 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
EPHA4-206ENST00000424339 NHP2Q9NX24 153 aaKnown RBP4.67□□□□□ -1.66
EPHA4-206ENST00000424339 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
EPHA4-206ENST00000424339 IGLV10-54A0A075B6I4 117 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 IGHV3OR16-9A0A0B4J2B5 98 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 TINCRA0A1B0GVN0 87 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 ZNF815PA8K554 130 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 K7ERU9 68 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 COX7A2LO14548 114 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 APOMO95445 188 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 XCL1P47992 114 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 HERVK_113P61574 105 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 RNASE13Q5GAN3 156 aaKnown RBP4.66□□□□□ -1.66
EPHA4-206ENST00000424339 HIST1H4GQ99525 98 aa4.66□□□□□ -1.66
EPHA4-206ENST00000424339 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-206ENST00000424339 SPANXB1Q9NS25 103 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-206ENST00000424339 A0A087WZ39 114 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 F8WDY8 70 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 RTL8CO15255 209 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 TSPEAR-AS2P59090 65 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 FOXI1Q12951 378 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 LINC00242Q5T6M2 205 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 SERTAD4-AS1Q5TG53 156 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 KRTAP26-1Q6PEX3 210 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 PLEKHB2Q96CS7 222 aa4.65□□□□□ -1.67
EPHA4-206ENST00000424339 IGLV5-45A0A087WSX0 123 aa4.64□□□□□ -1.67
EPHA4-206ENST00000424339 IGHV1-58A0A0C4DH39 117 aa4.64□□□□□ -1.67
EPHA4-206ENST00000424339 TMEM223A0PJW6 202 aa4.64□□□□□ -1.67
EPHA4-206ENST00000424339 PKIGQ9Y2B9 76 aa4.64□□□□□ -1.67
EPHA4-206ENST00000424339 A0A087WTM6 91 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 GVQW2A0A096LPI5 108 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-206ENST00000424339 LRCOL1A6NCL2 159 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 PRYO14603 147 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 LEPROTO15243 131 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 ZNF22P17026 224 aaPredicted RBP4.63□□□□□ -1.67
EPHA4-206ENST00000424339 SFTA2Q6UW10 78 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 LYSTQ99698 3801 aa4.63□□□□□ -1.67
EPHA4-206ENST00000424339 KMT2AQ03164 3969 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-206ENST00000424339 A0A0J9YXV3 536 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms