RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 LRP2P98164 4655 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 TRAV13-1A0A0B4J241 112 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 RPL32P62910 135 aaKnown RBP3.6□□□□□ -1.83
LINC00458-201ENST00000423442 HIGD2BQ4VC39 106 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 KRTAP26-1Q6PEX3 210 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 SCXQ7RTU7 201 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 CIRBP-AS1Q8TBR5 109 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 FAM218AQ96MZ4 157 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 IMMP2LQ96T52 175 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 SMIM2Q9BVW6 85 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 MAP1LC3AQ9H492 121 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 SPANXA1Q9NS26 97 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 LAMTOR2Q9Y2Q5 125 aa3.6□□□□□ -1.83
LINC00458-201ENST00000423442 LOC389332A0A1B0GUA5 103 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 IFI27P40305 119 aaPredicted RBP3.59□□□□□ -1.83
LINC00458-201ENST00000423442 SEC61GP60059 68 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 COX6A2Q02221 97 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 SYCNQ0VAF6 134 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 Q6ZN92 141 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 C7orf33Q8WU49 177 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
LINC00458-201ENST00000423442 TRAV9-1A0A075B6T8 112 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 GVQW2A0A096LPI5 108 aaPredicted RBP3.58□□□□□ -1.84
LINC00458-201ENST00000423442 TGIF2-C20orf24A0A0A6YYL0 155 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 A0A1B0GXF2 115 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 TMEM218A2RU14 115 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 PCP4L1A6NKN8 68 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 K7EMI3 77 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 NPYP01303 97 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 RPL37AP61513 92 aaKnown RBP3.58□□□□□ -1.84
LINC00458-201ENST00000423442 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00458-201ENST00000423442 COX19Q49B96 90 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 RNASE13Q5GAN3 156 aaKnown RBP3.58□□□□□ -1.84
LINC00458-201ENST00000423442 C5orf38Q86SI9 138 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 CARD19Q96LW7 228 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 C2orf88Q9BSF0 95 aa3.58□□□□□ -1.84
LINC00458-201ENST00000423442 NXT2Q9NPJ8 142 aaKnown RBP3.58□□□□□ -1.84
LINC00458-201ENST00000423442 IGLV4-69A0A075B6H9 119 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 IGKV2-24A0A0C4DH68 120 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 OXTP01178 125 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 RPL39P62891 51 aaKnown RBP3.57□□□□□ -1.84
LINC00458-201ENST00000423442 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
LINC00458-201ENST00000423442 NDUFA5Q16718 116 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 TEX43Q6ZNM6 134 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 Q8N8P6 123 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 C15orf56Q8N910 161 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 TMEM141Q96I45 108 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 SEC11CQ9BY50 192 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 CYSLTR1Q9Y271 337 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 PYGO1Q9Y3Y4 419 aa3.57□□□□□ -1.84
LINC00458-201ENST00000423442 TNXBP22105 4242 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 LOC107984640A0A0U1RRK4 108 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 SEC11AP67812 179 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 COMMD7Q86VX2 200 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 STPG4Q8N801 248 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 OR10D4PQ8NGN7 298 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
LINC00458-201ENST00000423442 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
LINC00458-201ENST00000423442 NDUFA1O15239 70 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 MT-ND6P03923 174 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 CKS1BP61024 79 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 IFITM2Q01629 132 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 FABP9Q0Z7S8 132 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 RHEBQ15382 184 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 KIAA1644Q3SXP7 199 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 C6orf226Q5I0X4 101 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 Q6ZUT4 128 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 SPACA4Q8TDM5 124 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 ORAOV1Q8WV07 137 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 SCGB3A1Q96QR1 104 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 GNB1LQ9BYB4 327 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 GEMIN7Q9H840 131 aaKnown RBP3.55□□□□□ -1.84
LINC00458-201ENST00000423442 SMCO4Q9NRQ5 59 aa3.55□□□□□ -1.84
LINC00458-201ENST00000423442 SNAPINO95295 136 aa3.54□□□□□ -1.84
LINC00458-201ENST00000423442 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
LINC00458-201ENST00000423442 KRTAP10-4P60372 401 aaPredicted RBP3.54□□□□□ -1.84
LINC00458-201ENST00000423442 RPL18AQ02543 176 aaKnown RBP3.54□□□□□ -1.84
LINC00458-201ENST00000423442 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
LINC00458-201ENST00000423442 CIRBPQ14011 172 aaKnown RBP3.54□□□□□ -1.84
LINC00458-201ENST00000423442 FA2HQ7L5A8 372 aa3.54□□□□□ -1.84
LINC00458-201ENST00000423442 PACRGQ96M98 296 aaPredicted RBP3.54□□□□□ -1.84
LINC00458-201ENST00000423442 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
LINC00458-201ENST00000423442 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 A0A096LNI7 61 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 PANO1I0J062 215 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 APOC3P02656 99 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 HERVK_113P63121 156 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
LINC00458-201ENST00000423442 Q6ZRU5 148 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms