RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 HERC1Q15751 4861 aa5.41□□□□□ -1.54
MDC1-204ENST00000422266 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
MDC1-204ENST00000422266 HNRNPA3P51991 378 aaKnown RBP5.41□□□□□ -1.54
MDC1-204ENST00000422266 C9orf116Q5BN46 136 aaPredicted RBP5.41□□□□□ -1.54
MDC1-204ENST00000422266 BAGE3Q86Y29 109 aa5.41□□□□□ -1.54
MDC1-204ENST00000422266 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
MDC1-204ENST00000422266 AMELXQ99217 191 aa5.41□□□□□ -1.54
MDC1-204ENST00000422266 A0A096LNJ9 63 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 CKS1BP61024 79 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 PMCHL1Q16048 86 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 ERASQ7Z444 233 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 TOMM6Q96B49 74 aa5.4□□□□□ -1.54
MDC1-204ENST00000422266 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
MDC1-204ENST00000422266 IGIPA6NJ69 53 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 NDUFC2-KCTD14E9PQ53 114 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 LINC00614P0C842 121 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 CXCL5P42830 114 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 PDZD11Q5EBL8 140 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 C6orf226Q5I0X4 101 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 Q8IZM0 81 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
MDC1-204ENST00000422266 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
MDC1-204ENST00000422266 C5orf52A6NGY3 159 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 HSBP1O75506 76 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 S100A6P06703 90 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
MDC1-204ENST00000422266 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 FAM19A2Q8N3H0 131 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
MDC1-204ENST00000422266 A0A0J9YXV3 536 aa5.37□□□□□ -1.55
MDC1-204ENST00000422266 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
MDC1-204ENST00000422266 ODF1Q14990 250 aa5.37□□□□□ -1.55
MDC1-204ENST00000422266 LINC00173Q6ZV60 143 aa5.37□□□□□ -1.55
MDC1-204ENST00000422266 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
MDC1-204ENST00000422266 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 HBDP02042 147 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
MDC1-204ENST00000422266 GAGE2EQ4V326 116 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 GAGE2DQ9UEU5 116 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
MDC1-204ENST00000422266 F8VRH5 84 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 H3BRM9 83 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 LINC00469Q8N7U9 141 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 DIRC1Q969H9 104 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 HIST1H2BLQ99880 126 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
MDC1-204ENST00000422266 M0QXV9 152 aa5.34□□□□□ -1.55
MDC1-204ENST00000422266 FABP4P15090 132 aa5.34□□□□□ -1.55
MDC1-204ENST00000422266 UBE2BP63146 152 aa5.34□□□□□ -1.55
MDC1-204ENST00000422266 PMVKQ15126 192 aa5.34□□□□□ -1.55
MDC1-204ENST00000422266 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
MDC1-204ENST00000422266 C2orf82Q6UX34 121 aa5.34□□□□□ -1.55
MDC1-204ENST00000422266 PHF5AQ7RTV0 110 aaKnown RBP5.34□□□□□ -1.55
MDC1-204ENST00000422266 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
MDC1-204ENST00000422266 S100A2P29034 98 aa5.33□□□□□ -1.56
MDC1-204ENST00000422266 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
MDC1-204ENST00000422266 FAM19A5Q7Z5A7 132 aaPredicted RBP5.33□□□□□ -1.56
MDC1-204ENST00000422266 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
MDC1-204ENST00000422266 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 LEPROTL1O95214 131 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 ZC2HC1BQ5TFG8 222 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 COX7B2Q8TF08 81 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
MDC1-204ENST00000422266 LOC105371267A0A1B0GV96 52 aa5.31□□□□□ -1.56
MDC1-204ENST00000422266 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
MDC1-204ENST00000422266 ATP5LO75964 103 aa5.31□□□□□ -1.56
MDC1-204ENST00000422266 IFI27L1Q96BM0 104 aa5.31□□□□□ -1.56
MDC1-204ENST00000422266 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
MDC1-204ENST00000422266 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
MDC1-204ENST00000422266 C3orf79P0CE67 100 aa5.3□□□□□ -1.56
MDC1-204ENST00000422266 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
MDC1-204ENST00000422266 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
MDC1-204ENST00000422266 HSPB8Q9UJY1 196 aa5.3□□□□□ -1.56
MDC1-204ENST00000422266 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
MDC1-204ENST00000422266 H0Y9J4 135 aa5.29□□□□□ -1.56
MDC1-204ENST00000422266 SYS1-DBNDD2H3BUS1 97 aa5.29□□□□□ -1.56
MDC1-204ENST00000422266 IGLC3P0DOY3 106 aa5.29□□□□□ -1.56
MDC1-204ENST00000422266 KRTDAPP60985 99 aa5.29□□□□□ -1.56
MDC1-204ENST00000422266 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
MDC1-204ENST00000422266 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
MDC1-204ENST00000422266 H0Y8G0 127 aa5.28□□□□□ -1.56
MDC1-204ENST00000422266 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
MDC1-204ENST00000422266 COX17Q14061 63 aa5.28□□□□□ -1.56
MDC1-204ENST00000422266 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
MDC1-204ENST00000422266 MAP1LC3CQ9BXW4 147 aa5.28□□□□□ -1.56
MDC1-204ENST00000422266 ZNF861PO60384 105 aa5.27□□□□□ -1.57
MDC1-204ENST00000422266 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
MDC1-204ENST00000422266 AKR1D1P51857 326 aa5.27□□□□□ -1.57
MDC1-204ENST00000422266 NKAPP1Q8N9T2 125 aa5.27□□□□□ -1.57
MDC1-204ENST00000422266 PMCHL2Q9BQD1 86 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms