RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 J3QL48 77 aa13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 TLX1NBP0CAT3 122 aa13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 GAGE2EQ4V326 116 aa13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 C9orf116Q5BN46 136 aaPredicted RBP13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 Q6ZRP5 223 aa13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 GAGE2DQ9UEU5 116 aa13.42□□□□□ -0.26
FNDC3B-204ENST00000421757 IGLV5-45A0A087WSX0 123 aa13.39□□□□□ -0.27
FNDC3B-204ENST00000421757 SMIM1B2RUZ4 78 aa13.39□□□□□ -0.27
FNDC3B-204ENST00000421757 ATP5LO75964 103 aa13.39□□□□□ -0.27
FNDC3B-204ENST00000421757 PDZD11Q5EBL8 140 aa13.39□□□□□ -0.27
FNDC3B-204ENST00000421757 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
FNDC3B-204ENST00000421757 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
FNDC3B-204ENST00000421757 TRGC2P03986 189 aa13.38□□□□□ -0.27
FNDC3B-204ENST00000421757 SPINK8P0C7L1 97 aa13.38□□□□□ -0.27
FNDC3B-204ENST00000421757 KRTAP29-1A8MX34 341 aaPredicted RBP13.37□□□□□ -0.27
FNDC3B-204ENST00000421757 H3BRM9 83 aa13.37□□□□□ -0.27
FNDC3B-204ENST00000421757 PRR3P79522 188 aaKnown RBP13.37□□□□□ -0.27
FNDC3B-204ENST00000421757 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
FNDC3B-204ENST00000421757 IGLC3P0DOY3 106 aa13.36□□□□□ -0.27
FNDC3B-204ENST00000421757 CXCL5P42830 114 aa13.36□□□□□ -0.27
FNDC3B-204ENST00000421757 COX7B2Q8TF08 81 aa13.36□□□□□ -0.27
FNDC3B-204ENST00000421757 F8VRH5 84 aa13.35□□□□□ -0.27
FNDC3B-204ENST00000421757 FAM168BA1KXE4 195 aa13.34□□□□□ -0.27
FNDC3B-204ENST00000421757 PHF5AQ7RTV0 110 aaKnown RBP13.34□□□□□ -0.27
FNDC3B-204ENST00000421757 DMBT1Q9UGM3 2413 aaPredicted RBP13.33□□□□□ -0.27
FNDC3B-204ENST00000421757 HSBP1O75506 76 aa13.33□□□□□ -0.28
FNDC3B-204ENST00000421757 FAM19A5Q7Z5A7 132 aaPredicted RBP13.33□□□□□ -0.28
FNDC3B-204ENST00000421757 OXTP01178 125 aa13.32□□□□□ -0.28
FNDC3B-204ENST00000421757 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
FNDC3B-204ENST00000421757 COLCA2A8K830 154 aa13.3□□□□□ -0.28
FNDC3B-204ENST00000421757 ZNF22P17026 224 aaPredicted RBP13.3□□□□□ -0.28
FNDC3B-204ENST00000421757 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
FNDC3B-204ENST00000421757 IFI27L1Q96BM0 104 aa13.3□□□□□ -0.28
FNDC3B-204ENST00000421757 C9orf129Q5T035 196 aaKnown RBP13.29□□□□□ -0.28
FNDC3B-204ENST00000421757 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
FNDC3B-204ENST00000421757 TMEM170BQ5T4T1 132 aa13.28□□□□□ -0.28
FNDC3B-204ENST00000421757 C11orf86A6NJI1 115 aa13.27□□□□□ -0.29
FNDC3B-204ENST00000421757 XAGE1AQ9HD64 81 aa13.27□□□□□ -0.29
FNDC3B-204ENST00000421757 LRP1Q07954 4544 aaKnown RBP13.26□□□□□ -0.29
FNDC3B-204ENST00000421757 M0QXV9 152 aa13.26□□□□□ -0.29
FNDC3B-204ENST00000421757 PSORS1C2Q9UIG4 136 aa13.26□□□□□ -0.29
FNDC3B-204ENST00000421757 SERF1AO75920 110 aa13.25□□□□□ -0.29
FNDC3B-204ENST00000421757 TRAV12-1A0A0B4J245 112 aa13.24□□□□□ -0.29
FNDC3B-204ENST00000421757 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
FNDC3B-204ENST00000421757 SCO1O75880 301 aa13.24□□□□□ -0.29
FNDC3B-204ENST00000421757 KRTAP7-1Q8IUC3 87 aa13.24□□□□□ -0.29
FNDC3B-204ENST00000421757 HERC1Q15751 4861 aa13.24□□□□□ -0.29
FNDC3B-204ENST00000421757 UBE2BP63146 152 aa13.23□□□□□ -0.29
FNDC3B-204ENST00000421757 C1orf137Q5JT78 98 aa13.23□□□□□ -0.29
FNDC3B-204ENST00000421757 FAT3Q8TDW7 4589 aa13.23□□□□□ -0.29
FNDC3B-204ENST00000421757 H0Y8G0 127 aa13.22□□□□□ -0.29
FNDC3B-204ENST00000421757 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
FNDC3B-204ENST00000421757 LEPROTL1O95214 131 aa13.21□□□□□ -0.29
FNDC3B-204ENST00000421757 LINC00310P59036 64 aa13.2□□□□□ -0.3
FNDC3B-204ENST00000421757 SERTAD4-AS1Q5TG53 156 aa13.2□□□□□ -0.3
FNDC3B-204ENST00000421757 NUPR1O60356 82 aa13.18□□□□□ -0.3
FNDC3B-204ENST00000421757 PFN2P35080 140 aa13.18□□□□□ -0.3
FNDC3B-204ENST00000421757 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.34e-6■■■■□ 24.4
FNDC3B-204ENST00000421757 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
FNDC3B-204ENST00000421757 C22orf24Q9Y442 160 aa13.18□□□□□ -0.3
FNDC3B-204ENST00000421757 FABP4P15090 132 aa13.17□□□□□ -0.3
FNDC3B-204ENST00000421757 HSPB8Q9UJY1 196 aa13.17□□□□□ -0.3
FNDC3B-204ENST00000421757 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
FNDC3B-204ENST00000421757 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
FNDC3B-204ENST00000421757 LBHQ53QV2 105 aaPredicted RBP13.15□□□□□ -0.3
FNDC3B-204ENST00000421757 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
FNDC3B-204ENST00000421757 REG3GQ6UW15 175 aa13.15□□□□□ -0.3
FNDC3B-204ENST00000421757 ODF1Q14990 250 aa13.14□□□□□ -0.31
FNDC3B-204ENST00000421757 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
FNDC3B-204ENST00000421757 IGLV7-43P04211 117 aa13.13□□□□□ -0.31
FNDC3B-204ENST00000421757 MRPL55Q7Z7F7 128 aaKnown RBP13.12□□□□□ -0.31
FNDC3B-204ENST00000421757 COX17Q14061 63 aa13.11□□□□□ -0.31
FNDC3B-204ENST00000421757 TP73-AS1Q9UF72 201 aa13.11□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BKO60814 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BJP06899 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 MT1HL1P0DM35 61 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BOP23527 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BBP33778 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BDP58876 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BCP62807 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST2H2BEQ16778 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BHQ93079 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 LINC01600Q96MT4 127 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BNQ99877 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 HIST1H2BMQ99879 126 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
FNDC3B-204ENST00000421757 NKAPP1Q8N9T2 125 aa13.09□□□□□ -0.31
FNDC3B-204ENST00000421757 MAP1LC3CQ9BXW4 147 aa13.08□□□□□ -0.32
FNDC3B-204ENST00000421757 SND1-IT1Q9HBX3 110 aa13.08□□□□□ -0.32
FNDC3B-204ENST00000421757 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
FNDC3B-204ENST00000421757 PLNP26678 52 aa13.07□□□□□ -0.32
FNDC3B-204ENST00000421757 LINC00158P58513 81 aa13.07□□□□□ -0.32
FNDC3B-204ENST00000421757 DIRC1Q969H9 104 aa13.07□□□□□ -0.32
FNDC3B-204ENST00000421757 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
FNDC3B-204ENST00000421757 PMCHL2Q9BQD1 86 aa13.06□□□□□ -0.32
FNDC3B-204ENST00000421757 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
FNDC3B-204ENST00000421757 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
FNDC3B-204ENST00000421757 DPM2O94777 84 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms