RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 NUDT11Q96G61 164 aa4.75□□□□□ -1.65
TRIM39-206ENST00000420746 HIGD2AQ9BW72 106 aa4.75□□□□□ -1.65
TRIM39-206ENST00000420746 M0R378 163 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 PPP1R2P9O14990 202 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 Q6ZN92 141 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 KCNRGQ8N5I3 272 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 MBD3L1Q8WWY6 194 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 TMEM191AQ9H0A3 160 aa4.74□□□□□ -1.65
TRIM39-206ENST00000420746 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 MT2AP02795 61 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 RAB4AP20338 218 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 CXCL5P42830 114 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
TRIM39-206ENST00000420746 SFT2D1Q8WV19 159 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 TOMM7Q9P0U1 55 aa4.73□□□□□ -1.65
TRIM39-206ENST00000420746 C9orf92A6NGG3 77 aa4.72□□□□□ -1.65
TRIM39-206ENST00000420746 LINC00483Q53H64 154 aa4.72□□□□□ -1.65
TRIM39-206ENST00000420746 NRACQ8N912 160 aa4.72□□□□□ -1.65
TRIM39-206ENST00000420746 ALKBH7Q9BT30 221 aaPredicted RBP4.72□□□□□ -1.65
TRIM39-206ENST00000420746 MANBALQ9NQG1 85 aa4.71□□□□□ -1.66
TRIM39-206ENST00000420746 SCO1O75880 301 aa4.7□□□□□ -1.66
TRIM39-206ENST00000420746 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
TRIM39-206ENST00000420746 MOBPQ13875 183 aa4.7□□□□□ -1.66
TRIM39-206ENST00000420746 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
TRIM39-206ENST00000420746 TMA7Q9Y2S6 64 aaKnown RBP4.7□□□□□ -1.66
TRIM39-206ENST00000420746 PYGO1Q9Y3Y4 419 aa4.7□□□□□ -1.66
TRIM39-206ENST00000420746 MT1FP04733 61 aa4.69□□□□□ -1.66
TRIM39-206ENST00000420746 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
TRIM39-206ENST00000420746 AMN1Q8IY45 258 aa4.69□□□□□ -1.66
TRIM39-206ENST00000420746 C20orf78Q9BR46 151 aa4.69□□□□□ -1.66
TRIM39-206ENST00000420746 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 A0A1B0GV50 99 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 A8MWL6 223 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 SMKR1H3BMG3 65 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 IGLV6-57P01721 117 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 Q6Q795 121 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 FAM213BQ8TBF2 198 aa4.68□□□□□ -1.66
TRIM39-206ENST00000420746 TRBV24-1A0A075B6N3 115 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 A0A1B0GUT8 65 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 PDE6DO43924 150 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 VPREB1P12018 145 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 TEX43Q6ZNM6 134 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 TMEM141Q96I45 108 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 C2orf88Q9BSF0 95 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
TRIM39-206ENST00000420746 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
TRIM39-206ENST00000420746 CT83Q5H943 113 aa4.66□□□□□ -1.66
TRIM39-206ENST00000420746 FAM19A3Q7Z5A8 133 aa4.66□□□□□ -1.66
TRIM39-206ENST00000420746 LINC00862A6NCI5 91 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 K7EN84 100 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 LINC00310P59036 64 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 RPL24P83731 157 aaKnown RBP4.65□□□□□ -1.67
TRIM39-206ENST00000420746 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 LIMD2Q9BT23 127 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 EIF5A2Q9GZV4 153 aaKnown RBP4.65□□□□□ -1.67
TRIM39-206ENST00000420746 GNG13Q9P2W3 67 aa4.65□□□□□ -1.67
TRIM39-206ENST00000420746 GATCO43716 136 aaKnown RBP4.64□□□□□ -1.67
TRIM39-206ENST00000420746 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 SEC11AP67812 179 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 Q5BKY6 102 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 AKAP14Q86UN6 197 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 SMIM2Q9BVW6 85 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 MED9Q9NWA0 146 aa4.64□□□□□ -1.67
TRIM39-206ENST00000420746 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
TRIM39-206ENST00000420746 HERVK_113P63121 156 aa4.63□□□□□ -1.67
TRIM39-206ENST00000420746 SMCR5Q8TEV8 140 aa4.63□□□□□ -1.67
TRIM39-206ENST00000420746 AMELXQ99217 191 aa4.63□□□□□ -1.67
TRIM39-206ENST00000420746 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
TRIM39-206ENST00000420746 NPSP0C0P6 89 aa4.62□□□□□ -1.67
TRIM39-206ENST00000420746 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
TRIM39-206ENST00000420746 OCC1Q8TAD7 63 aa4.62□□□□□ -1.67
TRIM39-206ENST00000420746 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
TRIM39-206ENST00000420746 C20orf202A1L168 122 aa4.61□□□□□ -1.67
TRIM39-206ENST00000420746 GIPP09681 153 aaPredicted RBP4.61□□□□□ -1.67
TRIM39-206ENST00000420746 RAB5BP61020 215 aa4.61□□□□□ -1.67
TRIM39-206ENST00000420746 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
TRIM39-206ENST00000420746 C2orf66Q6UXQ4 117 aa4.61□□□□□ -1.67
TRIM39-206ENST00000420746 LINC00299Q6ZSB3 139 aa4.61□□□□□ -1.67
TRIM39-206ENST00000420746 SPRR1AP35321 89 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 RIGQ13278 110 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 PDZD11Q5EBL8 140 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 FAM104BQ5XKR9 115 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 COX7B2Q8TF08 81 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 TIMM17AQ99595 171 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 VCX2Q9H322 139 aa4.6□□□□□ -1.67
TRIM39-206ENST00000420746 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
TRIM39-206ENST00000420746 PRYO14603 147 aa4.59□□□□□ -1.67
TRIM39-206ENST00000420746 S100ZQ8WXG8 99 aa4.59□□□□□ -1.67
TRIM39-206ENST00000420746 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
TRIM39-206ENST00000420746 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
TRIM39-206ENST00000420746 TEX46H3BTG2 121 aa4.58□□□□□ -1.68
TRIM39-206ENST00000420746 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
TRIM39-206ENST00000420746 RAB5AP20339 215 aa4.58□□□□□ -1.68
TRIM39-206ENST00000420746 CKS2P33552 79 aa4.58□□□□□ -1.68
TRIM39-206ENST00000420746 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms