RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PACRGQ96M98 296 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-211ENST00000420363 PKHD1L1Q86WI1 4243 aa13.41□□□□□ -0.26
CPNE1-211ENST00000420363 PRSS2P07478 247 aa13.4□□□□□ -0.26
CPNE1-211ENST00000420363 LINC00469Q8N7U9 141 aa13.4□□□□□ -0.26
CPNE1-211ENST00000420363 PDZD11Q5EBL8 140 aa13.38□□□□□ -0.27
CPNE1-211ENST00000420363 CHCHD1Q96BP2 118 aaKnown RBP13.38□□□□□ -0.27
CPNE1-211ENST00000420363 SMIM1B2RUZ4 78 aa13.37□□□□□ -0.27
CPNE1-211ENST00000420363 ATP5LO75964 103 aa13.37□□□□□ -0.27
CPNE1-211ENST00000420363 CXCL5P42830 114 aa13.37□□□□□ -0.27
CPNE1-211ENST00000420363 C2orf82Q6UX34 121 aa13.37□□□□□ -0.27
CPNE1-211ENST00000420363 TOMM7Q9P0U1 55 aa13.37□□□□□ -0.27
CPNE1-211ENST00000420363 CKS1BP61024 79 aa13.36□□□□□ -0.27
CPNE1-211ENST00000420363 C6orf226Q5I0X4 101 aa13.36□□□□□ -0.27
CPNE1-211ENST00000420363 Q6ZRP5 223 aa13.36□□□□□ -0.27
CPNE1-211ENST00000420363 A0A1W2PNN7 141 aa13.35□□□□□ -0.27
CPNE1-211ENST00000420363 NDUFC2-KCTD14E9PQ53 114 aa13.35□□□□□ -0.27
CPNE1-211ENST00000420363 IGLC3P0DOY3 106 aa13.35□□□□□ -0.27
CPNE1-211ENST00000420363 HNRNPA3P51991 378 aaKnown RBP13.35□□□□□ -0.27
CPNE1-211ENST00000420363 PRR3P79522 188 aaKnown RBP13.35□□□□□ -0.27
CPNE1-211ENST00000420363 PMCHL1Q16048 86 aa13.35□□□□□ -0.27
CPNE1-211ENST00000420363 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-211ENST00000420363 FAT3Q8TDW7 4589 aa13.35□□□□□ -0.27
CPNE1-211ENST00000420363 HMCN2Q8NDA2 5059 aa13.34□□□□□ -0.27
CPNE1-211ENST00000420363 F8VRH5 84 aa13.33□□□□□ -0.28
CPNE1-211ENST00000420363 H3BRM9 83 aa13.33□□□□□ -0.28
CPNE1-211ENST00000420363 PLA2G2DQ9UNK4 145 aa13.33□□□□□ -0.28
CPNE1-211ENST00000420363 TRGC2P03986 189 aa13.31□□□□□ -0.28
CPNE1-211ENST00000420363 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
CPNE1-211ENST00000420363 COX7B2Q8TF08 81 aa13.3□□□□□ -0.28
CPNE1-211ENST00000420363 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
CPNE1-211ENST00000420363 NDUFA6P56556 154 aa13.29□□□□□ -0.28
CPNE1-211ENST00000420363 SPINK8P0C7L1 97 aa13.28□□□□□ -0.28
CPNE1-211ENST00000420363 COLCA2A8K830 154 aa13.27□□□□□ -0.29
CPNE1-211ENST00000420363 HSBP1O75506 76 aa13.27□□□□□ -0.29
CPNE1-211ENST00000420363 ZNF22P17026 224 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-211ENST00000420363 BAGE3Q86Y29 109 aa13.27□□□□□ -0.29
CPNE1-211ENST00000420363 IGLV5-39A0A0G2JS06 123 aa13.26□□□□□ -0.29
CPNE1-211ENST00000420363 TRAV12-1A0A0B4J245 112 aa13.25□□□□□ -0.29
CPNE1-211ENST00000420363 UBR4Q5T4S7 5183 aa13.25□□□□□ -0.29
CPNE1-211ENST00000420363 FAM168BA1KXE4 195 aa13.24□□□□□ -0.29
CPNE1-211ENST00000420363 C9orf129Q5T035 196 aaKnown RBP13.24□□□□□ -0.29
CPNE1-211ENST00000420363 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
CPNE1-211ENST00000420363 C11orf86A6NJI1 115 aa13.23□□□□□ -0.29
CPNE1-211ENST00000420363 ODF1Q14990 250 aa13.23□□□□□ -0.29
CPNE1-211ENST00000420363 PHF5AQ7RTV0 110 aaKnown RBP13.23□□□□□ -0.29
CPNE1-211ENST00000420363 FAM19A5Q7Z5A7 132 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-211ENST00000420363 LINC00310P59036 64 aa13.21□□□□□ -0.29
CPNE1-211ENST00000420363 KRTAP7-1Q8IUC3 87 aa13.21□□□□□ -0.29
CPNE1-211ENST00000420363 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.29
CPNE1-211ENST00000420363 M0QXV9 152 aa13.2□□□□□ -0.3
CPNE1-211ENST00000420363 SERF1AO75920 110 aa13.2□□□□□ -0.3
CPNE1-211ENST00000420363 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
CPNE1-211ENST00000420363 PSORS1C2Q9UIG4 136 aa13.2□□□□□ -0.3
CPNE1-211ENST00000420363 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
CPNE1-211ENST00000420363 SPINK6Q6UWN8 80 aa13.19□□□□□ -0.3
CPNE1-211ENST00000420363 SFTA2Q6UW10 78 aa13.18□□□□□ -0.3
CPNE1-211ENST00000420363 XAGE1AQ9HD64 81 aa13.17□□□□□ -0.3
CPNE1-211ENST00000420363 LEPROTL1O95214 131 aa13.16□□□□□ -0.3
CPNE1-211ENST00000420363 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPNE1-211ENST00000420363 MT1HL1P0DM35 61 aa13.14□□□□□ -0.31
CPNE1-211ENST00000420363 C1orf137Q5JT78 98 aa13.14□□□□□ -0.31
CPNE1-211ENST00000420363 TP73-AS1Q9UF72 201 aa13.14□□□□□ -0.31
CPNE1-211ENST00000420363 SCO1O75880 301 aa13.13□□□□□ -0.31
CPNE1-211ENST00000420363 TMEM223A0PJW6 202 aa13.12□□□□□ -0.31
CPNE1-211ENST00000420363 UBE2BP63146 152 aa13.12□□□□□ -0.31
CPNE1-211ENST00000420363 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
CPNE1-211ENST00000420363 COX17Q14061 63 aa13.11□□□□□ -0.31
CPNE1-211ENST00000420363 REG3GQ6UW15 175 aa13.11□□□□□ -0.31
CPNE1-211ENST00000420363 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-211ENST00000420363 LBHQ53QV2 105 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-211ENST00000420363 KRTAP11-1Q8IUC1 163 aa13.1□□□□□ -0.31
CPNE1-211ENST00000420363 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
CPNE1-211ENST00000420363 C22orf24Q9Y442 160 aa13.1□□□□□ -0.31
CPNE1-211ENST00000420363 NUPR1O60356 82 aa13.09□□□□□ -0.31
CPNE1-211ENST00000420363 HIST1H2BKO60814 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 IGLV7-43P04211 117 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BJP06899 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BOP23527 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BBP33778 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BDP58876 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BCP62807 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.32
CPNE1-211ENST00000420363 IGLV5-37A0A075B6J1 123 aa13.07□□□□□ -0.32
CPNE1-211ENST00000420363 MRPL55Q7Z7F7 128 aaKnown RBP13.07□□□□□ -0.32
CPNE1-211ENST00000420363 PLNP26678 52 aa13.06□□□□□ -0.32
CPNE1-211ENST00000420363 PFN2P35080 140 aa13.06□□□□□ -0.32
CPNE1-211ENST00000420363 H0Y8G0 127 aa13.05□□□□□ -0.32
CPNE1-211ENST00000420363 TNXBP22105 4242 aa13.04□□□□□ -0.32
CPNE1-211ENST00000420363 FABP4P15090 132 aa13.03□□□□□ -0.32
CPNE1-211ENST00000420363 DIRC1Q969H9 104 aa13.03□□□□□ -0.32
CPNE1-211ENST00000420363 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.33
CPNE1-211ENST00000420363 DPM2O94777 84 aa13.01□□□□□ -0.33
CPNE1-211ENST00000420363 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
CPNE1-211ENST00000420363 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
CPNE1-211ENST00000420363 HERV-K104P63124 156 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms