RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
SHMT1P1-201ENST00000419974 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
SHMT1P1-201ENST00000419974 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
SHMT1P1-201ENST00000419974 A0A0J9YXY3 114 aa9.41□□□□□ -0.9
SHMT1P1-201ENST00000419974 Q6ZVH6 145 aa9.41□□□□□ -0.9
SHMT1P1-201ENST00000419974 PPDPFQ9H3Y8 114 aa9.41□□□□□ -0.9
SHMT1P1-201ENST00000419974 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
SHMT1P1-201ENST00000419974 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
SHMT1P1-201ENST00000419974 SPAG11BQ08648 103 aa9.4□□□□□ -0.9
SHMT1P1-201ENST00000419974 COX17Q14061 63 aa9.4□□□□□ -0.9
SHMT1P1-201ENST00000419974 TAL2Q16559 108 aa9.4□□□□□ -0.9
SHMT1P1-201ENST00000419974 PTTG1IPP53801 180 aa9.39□□□□□ -0.91
SHMT1P1-201ENST00000419974 CKS1BP61024 79 aa9.39□□□□□ -0.91
SHMT1P1-201ENST00000419974 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 HNRNPA3P51991 378 aaKnown RBP9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 RNF151Q2KHN1 245 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 LITAFQ99732 161 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
SHMT1P1-201ENST00000419974 TRBV30A0A0K0K1B3 111 aa9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 CIRBPQ14011 172 aaKnown RBP9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 DNAH17Q9UFH2 4485 aa9.37□□□□□ -0.91
SHMT1P1-201ENST00000419974 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
SHMT1P1-201ENST00000419974 SPANXDQ9BXN6 97 aa9.36□□□□□ -0.91
SHMT1P1-201ENST00000419974 SPANXCQ9NY87 97 aa9.36□□□□□ -0.91
SHMT1P1-201ENST00000419974 PSCAO43653 123 aa9.35□□□□□ -0.91
SHMT1P1-201ENST00000419974 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 GCSHP23434 173 aa9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 HSD52Q0P140 79 aa9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
SHMT1P1-201ENST00000419974 IFITM1P13164 125 aa9.33□□□□□ -0.92
SHMT1P1-201ENST00000419974 C2orf82Q6UX34 121 aa9.33□□□□□ -0.92
SHMT1P1-201ENST00000419974 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
SHMT1P1-201ENST00000419974 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
SHMT1P1-201ENST00000419974 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
SHMT1P1-201ENST00000419974 CTAG1AP78358 180 aa9.32□□□□□ -0.92
SHMT1P1-201ENST00000419974 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
SHMT1P1-201ENST00000419974 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
SHMT1P1-201ENST00000419974 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
SHMT1P1-201ENST00000419974 M0R2N4 97 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 C10orf25Q5T742 122 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 M0R143 59 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 SLPIP03973 132 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 CEND1Q8N111 149 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
SHMT1P1-201ENST00000419974 PCP4L1A6NKN8 68 aa9.3□□□□□ -0.92
SHMT1P1-201ENST00000419974 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
SHMT1P1-201ENST00000419974 Q6ZRU5 148 aa9.3□□□□□ -0.92
SHMT1P1-201ENST00000419974 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
SHMT1P1-201ENST00000419974 A0A087WTM6 91 aa9.29□□□□□ -0.92
SHMT1P1-201ENST00000419974 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
SHMT1P1-201ENST00000419974 WFDC2Q14508 124 aa9.29□□□□□ -0.92
SHMT1P1-201ENST00000419974 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
SHMT1P1-201ENST00000419974 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
SHMT1P1-201ENST00000419974 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
SHMT1P1-201ENST00000419974 BVES-AS1Q5T3Y7 98 aa9.28□□□□□ -0.92
SHMT1P1-201ENST00000419974 Q8N814 137 aa9.28□□□□□ -0.92
SHMT1P1-201ENST00000419974 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
SHMT1P1-201ENST00000419974 HECTD4Q9Y4D8 3996 aa9.27□□□□□ -0.93
SHMT1P1-201ENST00000419974 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
SHMT1P1-201ENST00000419974 LINC00158P58513 81 aa9.27□□□□□ -0.93
SHMT1P1-201ENST00000419974 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
SHMT1P1-201ENST00000419974 LINC00308Q8TCZ7 52 aa9.27□□□□□ -0.93
SHMT1P1-201ENST00000419974 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
SHMT1P1-201ENST00000419974 A6NJY4 79 aa9.26□□□□□ -0.93
SHMT1P1-201ENST00000419974 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
SHMT1P1-201ENST00000419974 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
SHMT1P1-201ENST00000419974 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
SHMT1P1-201ENST00000419974 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
SHMT1P1-201ENST00000419974 LECT2O14960 151 aa9.25□□□□□ -0.93
SHMT1P1-201ENST00000419974 RTL8CO15255 209 aa9.25□□□□□ -0.93
SHMT1P1-201ENST00000419974 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
SHMT1P1-201ENST00000419974 PFN2P35080 140 aa9.24□□□□□ -0.93
SHMT1P1-201ENST00000419974 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
SHMT1P1-201ENST00000419974 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
SHMT1P1-201ENST00000419974 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
SHMT1P1-201ENST00000419974 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
SHMT1P1-201ENST00000419974 NDUFC2O95298 119 aa9.23□□□□□ -0.93
SHMT1P1-201ENST00000419974 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
SHMT1P1-201ENST00000419974 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
SHMT1P1-201ENST00000419974 HINT1P49773 126 aaPredicted RBP9.22□□□□□ -0.93
SHMT1P1-201ENST00000419974 FXYD2P54710 66 aa9.22□□□□□ -0.93
SHMT1P1-201ENST00000419974 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
SHMT1P1-201ENST00000419974 LOC107984640A0A0U1RRK4 108 aa9.21□□□□□ -0.94
SHMT1P1-201ENST00000419974 EREGO14944 169 aa9.21□□□□□ -0.94
SHMT1P1-201ENST00000419974 Q6ZRP5 223 aa9.21□□□□□ -0.94
SHMT1P1-201ENST00000419974 DAND5Q8N907 189 aa9.21□□□□□ -0.94
SHMT1P1-201ENST00000419974 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms