RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 CTAG1AP78358 180 aa5.39□□□□□ -1.55
AP001042.1-201ENST00000416842 MIAQ16674 131 aa5.39□□□□□ -1.55
AP001042.1-201ENST00000416842 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
AP001042.1-201ENST00000416842 Q9H8V8 135 aa5.39□□□□□ -1.55
AP001042.1-201ENST00000416842 IGHV3-64A0A075B6Q5 118 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 NDUFA1O15239 70 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 RTL8CO15255 209 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 LITAFQ99732 161 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 HSPG2P98160 4391 aa5.38□□□□□ -1.55
AP001042.1-201ENST00000416842 IGKV3OR2-268A0A0C4DH90 116 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 A0A0J9YXY3 114 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 COX7A2LO14548 114 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 XCL1P47992 114 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 HNRNPA3P51991 378 aaKnown RBP5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 TAL2Q16559 108 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 C5orf38Q86SI9 138 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 TM2D2Q9BX73 214 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 NDUFA12Q9UI09 145 aa5.37□□□□□ -1.55
AP001042.1-201ENST00000416842 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 TIMM17BO60830 172 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 PTTG1IPP53801 180 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 CLPSL2Q6UWE3 100 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 Q8IZM0 81 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 PKD1P98161 4303 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 HERC1Q15751 4861 aa5.36□□□□□ -1.55
AP001042.1-201ENST00000416842 IGLV10-54A0A075B6I4 117 aa5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 BVES-AS1Q5T3Y7 98 aa5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
AP001042.1-201ENST00000416842 M0R143 59 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 HERV-K104P63124 156 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 HSD52Q0P140 79 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 Q6ZVH6 145 aa5.34□□□□□ -1.55
AP001042.1-201ENST00000416842 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 A0A1B0GWB2 263 aa5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 CRPP02741 224 aa5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 CEND1Q8N111 149 aa5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 NTN5Q8WTR8 489 aaPredicted RBP5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 SPANXDQ9BXN6 97 aa5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 SPANXCQ9NY87 97 aa5.33□□□□□ -1.56
AP001042.1-201ENST00000416842 LOC107984156A0A0G2JMH3 177 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 F8WDY8 70 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 M0R2N4 97 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 EREGO14944 169 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 CDK2AP2O75956 126 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 APOMO95445 188 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 ARL17AQ8IVW1 177 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 C1orf43Q9BWL3 253 aa5.32□□□□□ -1.56
AP001042.1-201ENST00000416842 CXCL5P42830 114 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 HINT1P49773 126 aaPredicted RBP5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 FXYD2P54710 66 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 Q6ZR54 194 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 Q8N1X5 172 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 ORAOV1Q8WV07 137 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 COX11Q9Y6N1 276 aa5.31□□□□□ -1.56
AP001042.1-201ENST00000416842 NBDYA0A0U1RRE5 68 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 IFITM1P13164 125 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 MALP21145 153 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 RMI2Q96E14 147 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 HIST1H4GQ99525 98 aa5.3□□□□□ -1.56
AP001042.1-201ENST00000416842 IGKV2D-24A0A075B6R9 120 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 SLPIP03973 132 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 COX17Q14061 63 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 COL5A1-AS1Q5SY13 56 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 C2orf82Q6UX34 121 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 C6orf223Q8N319 242 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 TOMM7Q9P0U1 55 aa5.29□□□□□ -1.56
AP001042.1-201ENST00000416842 C16orf90A8MZG2 172 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 TAX1BP3O14907 124 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 PRSS2P07478 247 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 SMIM13P0DJ93 91 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 SRSF9Q13242 221 aaKnown RBP eCLIP5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 RNF151Q2KHN1 245 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
AP001042.1-201ENST00000416842 SOSTDC1Q6X4U4 206 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms