RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ORMDL3Q8N138 153 aa5.87□□□□□ -1.47
MDC1-202ENST00000416571 ALKBH7Q9BT30 221 aaPredicted RBP5.87□□□□□ -1.47
MDC1-202ENST00000416571 TMEM136Q6ZRR5 245 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 Q8IZM0 81 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 LINC00304Q8N9R0 145 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 PRELID3AQ96N28 172 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 VCX2Q9H322 139 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 NAT8Q9UHE5 227 aa5.86□□□□□ -1.47
MDC1-202ENST00000416571 F8VRH5 84 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 UBE2AP49459 152 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 ANAPC11Q9NYG5 84 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 CYSLTR1Q9Y271 337 aa5.85□□□□□ -1.47
MDC1-202ENST00000416571 IGLV7-46A0A075B6I9 117 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 IGKV2D-26A0A0A0MRZ7 120 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 LOC389332A0A1B0GUA5 103 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 RPL37AP8A6NKH3 93 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
MDC1-202ENST00000416571 CXCL5P42830 114 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 SEC11AP67812 179 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 LINC00167Q96N53 147 aa5.84□□□□□ -1.47
MDC1-202ENST00000416571 A0A1B0GXF2 115 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 GAGE10A6NGK3 116 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 HERVK_113P63121 156 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 KRTAP13-2Q52LG2 175 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 MAP1LC3AQ9H492 121 aa5.83□□□□□ -1.48
MDC1-202ENST00000416571 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
MDC1-202ENST00000416571 ORMDL2Q53FV1 153 aa5.82□□□□□ -1.48
MDC1-202ENST00000416571 AKAP14Q86UN6 197 aa5.82□□□□□ -1.48
MDC1-202ENST00000416571 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
MDC1-202ENST00000416571 AMELXQ99217 191 aa5.82□□□□□ -1.48
MDC1-202ENST00000416571 LAMTOR2Q9Y2Q5 125 aa5.82□□□□□ -1.48
MDC1-202ENST00000416571 PRSS47A8MTI9 375 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 NPSP0C0P6 89 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 PAPPA-AS1Q5QFB9 102 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 ATP5L2Q7Z4Y8 100 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 FAM19A3Q7Z5A8 133 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 CDKN2A-AS1Q9UH64 79 aa5.81□□□□□ -1.48
MDC1-202ENST00000416571 PNRC1Q12796 327 aaPredicted RBP5.8□□□□□ -1.48
MDC1-202ENST00000416571 Q8N8P6 123 aa5.8□□□□□ -1.48
MDC1-202ENST00000416571 IGKV2-28A0A075B6P5 120 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 K7EMI3 77 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 IGKV2D-28P01615 120 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 CTAG1AP78358 180 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 PEA15Q15121 130 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
MDC1-202ENST00000416571 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 IGIPA6NJ69 53 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
MDC1-202ENST00000416571 G0S2P27469 103 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 RAB5BP61020 215 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 PRLHP81277 87 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
MDC1-202ENST00000416571 SMIM1B2RUZ4 78 aa5.77□□□□□ -1.49
MDC1-202ENST00000416571 C9JQL5 133 aa5.77□□□□□ -1.49
MDC1-202ENST00000416571 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
MDC1-202ENST00000416571 PDZD11Q5EBL8 140 aa5.77□□□□□ -1.49
MDC1-202ENST00000416571 FAM19A1Q7Z5A9 133 aa5.77□□□□□ -1.49
MDC1-202ENST00000416571 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
MDC1-202ENST00000416571 TIMM17AQ99595 171 aa5.76□□□□□ -1.49
MDC1-202ENST00000416571 NXT2Q9NPJ8 142 aaKnown RBP5.76□□□□□ -1.49
MDC1-202ENST00000416571 ATP5LO75964 103 aa5.75□□□□□ -1.49
MDC1-202ENST00000416571 SRSF3P84103 164 aaKnown RBP5.75□□□□□ -1.49
MDC1-202ENST00000416571 SPAG11AQ6PDA7 123 aa5.75□□□□□ -1.49
MDC1-202ENST00000416571 TINCRA0A1B0GVN0 87 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 SCO1O75880 301 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 FP248Q71RG6 208 aaPredicted RBP5.74□□□□□ -1.49
MDC1-202ENST00000416571 CBLN2Q8IUK8 224 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 SCGB3A1Q96QR1 104 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
MDC1-202ENST00000416571 SPINK8P0C7L1 97 aa5.73□□□□□ -1.49
MDC1-202ENST00000416571 PFN2P35080 140 aa5.73□□□□□ -1.49
MDC1-202ENST00000416571 ERASQ7Z444 233 aa5.73□□□□□ -1.49
MDC1-202ENST00000416571 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
MDC1-202ENST00000416571 TMEM238C9JI98 176 aa5.72□□□□□ -1.49
MDC1-202ENST00000416571 RPL24P83731 157 aaKnown RBP5.72□□□□□ -1.49
MDC1-202ENST00000416571 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
MDC1-202ENST00000416571 HIGD2AQ9BW72 106 aa5.72□□□□□ -1.49
MDC1-202ENST00000416571 GNB1LQ9BYB4 327 aa5.72□□□□□ -1.49
MDC1-202ENST00000416571 H3BRM9 83 aa5.71□□□□□ -1.5
MDC1-202ENST00000416571 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
MDC1-202ENST00000416571 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
MDC1-202ENST00000416571 M0R378 163 aa5.7□□□□□ -1.5
MDC1-202ENST00000416571 MT-ND4LP03901 98 aa5.7□□□□□ -1.5
MDC1-202ENST00000416571 VPREB1P12018 145 aa5.7□□□□□ -1.5
MDC1-202ENST00000416571 SEC61BP60468 96 aaKnown RBP5.7□□□□□ -1.5
MDC1-202ENST00000416571 MRPL18Q9H0U6 180 aaKnown RBP5.7□□□□□ -1.5
MDC1-202ENST00000416571 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
MDC1-202ENST00000416571 LCE2BO14633 110 aa5.69□□□□□ -1.5
MDC1-202ENST00000416571 RAB14P61106 215 aa5.69□□□□□ -1.5
MDC1-202ENST00000416571 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms