RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TRGV1A0A0A0MS02 117 aa5.65□□□□□ -1.5
SIK3-203ENST00000415541 IGLV1-40P01703 118 aa5.65□□□□□ -1.5
SIK3-203ENST00000415541 HTN3P15516 51 aa5.65□□□□□ -1.51
SIK3-203ENST00000415541 OBSCN-AS1Q96MR7 158 aa5.65□□□□□ -1.51
SIK3-203ENST00000415541 NCR3O14931 201 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 IGHV1OR15-1A0A075B7D0 117 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 IGHV3-16A0A0C4DH30 117 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
SIK3-203ENST00000415541 PIK3CD-AS1Q5SR53 167 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 LECT2O14960 151 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 MPLKIPQ8TAP9 179 aa5.64□□□□□ -1.51
SIK3-203ENST00000415541 TMEM89A2RUT3 159 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 INSP01308 110 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 CFHR3Q02985 330 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 LINC01006Q8NI28 216 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 U3KQE9 123 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 LINC00474Q9P2X8 69 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
SIK3-203ENST00000415541 IL17DQ8TAD2 202 aa5.63□□□□□ -1.51
SIK3-203ENST00000415541 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
SIK3-203ENST00000415541 C4orf3Q8WVX3 66 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 RMI2Q96E14 147 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 MGAM2Q2M2H8 2515 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 VPS13CQ709C8 3753 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 PLAC8L1A1L4L8 177 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 DEFB130BP0DP73 79 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 DEFB130AP0DP74 79 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 LYPD5Q6UWN5 251 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 RETNQ9HD89 108 aa5.62□□□□□ -1.51
SIK3-203ENST00000415541 CD164Q04900 197 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 A0A087WYN8 130 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 TRGV4A0A0C4DH28 118 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 K7EQG2 157 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 MIFP14174 115 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 ESM1Q9NQ30 184 aa5.61□□□□□ -1.51
SIK3-203ENST00000415541 APCP25054 2843 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 UBR5O95071 2799 aaPredicted RBP5.6□□□□□ -1.51
SIK3-203ENST00000415541 TMEM256-PLSCR3K7ERE1 68 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 SS18Q15532 418 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 KLLNB2CW77 178 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 PRM2P04554 102 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
SIK3-203ENST00000415541 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 DEFB114Q30KQ6 69 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
SIK3-203ENST00000415541 HAMPP81172 84 aa5.59□□□□□ -1.51
SIK3-203ENST00000415541 C19orf54Q5BKX5 351 aa5.59□□□□□ -1.51
SIK3-203ENST00000415541 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
SIK3-203ENST00000415541 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.52
SIK3-203ENST00000415541 CMC4P56277 68 aaPredicted RBP5.59□□□□□ -1.52
SIK3-203ENST00000415541 DAD1P61803 113 aa5.59□□□□□ -1.52
SIK3-203ENST00000415541 ESRGQ1W209 222 aa5.59□□□□□ -1.52
SIK3-203ENST00000415541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
SIK3-203ENST00000415541 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
SIK3-203ENST00000415541 UBE2L6O14933 153 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 C1orf158Q8N1D5 194 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
SIK3-203ENST00000415541 LINC00158P58513 81 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 C9orf129Q5T035 196 aaKnown RBP5.58□□□□□ -1.52
SIK3-203ENST00000415541 NF1P21359 2839 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 A0A096LNT2 108 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 WFDC10AQ9H1F0 79 aa5.58□□□□□ -1.52
SIK3-203ENST00000415541 SETXQ7Z333 2677 aaKnown RBP5.57□□□□□ -1.52
SIK3-203ENST00000415541 NOP10Q9NPE3 64 aaKnown RBP5.57□□□□□ -1.52
SIK3-203ENST00000415541 MUC4Q99102 2169 aa5.57□□□□□ -1.52
SIK3-203ENST00000415541 PAX4O43316 350 aa5.57□□□□□ -1.52
SIK3-203ENST00000415541 SLPIP03973 132 aa5.57□□□□□ -1.52
SIK3-203ENST00000415541 FUSP35637 526 aaKnown RBP eCLIP5.57□□□□□ -1.52
SIK3-203ENST00000415541 COL6A5A8TX70 2615 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 Q6ZRU5 148 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 CHCHD7Q9BUK0 85 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 STAB1Q9NY15 2570 aa5.56□□□□□ -1.52
SIK3-203ENST00000415541 SMIM1B2RUZ4 78 aa5.55□□□□□ -1.52
SIK3-203ENST00000415541 DEFB4AO15263 64 aa5.55□□□□□ -1.52
SIK3-203ENST00000415541 LINC00467Q9BRT7 94 aa5.55□□□□□ -1.52
SIK3-203ENST00000415541 IBA57-AS1B1ANH7 110 aa5.55□□□□□ -1.52
SIK3-203ENST00000415541 BAHCC1Q9P281 2608 aa5.55□□□□□ -1.52
SIK3-203ENST00000415541 CELSR1Q9NYQ6 3014 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 ERC2-IT1O76042 136 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 LINC00242Q5T6M2 205 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.54□□□□□ -1.52
SIK3-203ENST00000415541 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 A0A096LPF7 62 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 PDE6GP18545 87 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 CXCL6P80162 114 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 TMEM254Q8TBM7 123 aa5.54□□□□□ -1.52
SIK3-203ENST00000415541 TRAV10A0A0B4J240 114 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms