RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-204ENST00000414802 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 PYY3Q5JQD4 70 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 Q6ZRU5 148 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 C10orf25Q5T742 122 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
CNOT4-204ENST00000414802 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
CNOT4-204ENST00000414802 LEPROTO15243 131 aa8.52□□□□□ -1.05
CNOT4-204ENST00000414802 SYCNQ0VAF6 134 aa8.52□□□□□ -1.05
CNOT4-204ENST00000414802 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
CNOT4-204ENST00000414802 CARD19Q96LW7 228 aa8.52□□□□□ -1.05
CNOT4-204ENST00000414802 IGLV5-52A0A0A0MRZ9 124 aa8.51□□□□□ -1.05
CNOT4-204ENST00000414802 E9PLD3 99 aa8.51□□□□□ -1.05
CNOT4-204ENST00000414802 NDUFA1O15239 70 aa8.51□□□□□ -1.05
CNOT4-204ENST00000414802 CKS1BP61024 79 aa8.51□□□□□ -1.05
CNOT4-204ENST00000414802 J3QQQ9 107 aa8.5□□□□□ -1.05
CNOT4-204ENST00000414802 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
CNOT4-204ENST00000414802 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
CNOT4-204ENST00000414802 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
CNOT4-204ENST00000414802 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
CNOT4-204ENST00000414802 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
CNOT4-204ENST00000414802 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
CNOT4-204ENST00000414802 CXCL5P42830 114 aa8.49□□□□□ -1.05
CNOT4-204ENST00000414802 NMUP48645 174 aa8.49□□□□□ -1.05
CNOT4-204ENST00000414802 C9orf116Q5BN46 136 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-204ENST00000414802 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-204ENST00000414802 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-204ENST00000414802 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
CNOT4-204ENST00000414802 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
CNOT4-204ENST00000414802 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
CNOT4-204ENST00000414802 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
CNOT4-204ENST00000414802 PAM16Q9Y3D7 125 aa8.47□□□□□ -1.05
CNOT4-204ENST00000414802 C9orf163Q8N9P6 203 aa8.46□□□□□ -1.05
CNOT4-204ENST00000414802 F8WDY8 70 aa8.46□□□□□ -1.06
CNOT4-204ENST00000414802 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
CNOT4-204ENST00000414802 TP73-AS1Q9UF72 201 aa8.46□□□□□ -1.06
CNOT4-204ENST00000414802 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
CNOT4-204ENST00000414802 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
CNOT4-204ENST00000414802 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
CNOT4-204ENST00000414802 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
CNOT4-204ENST00000414802 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
CNOT4-204ENST00000414802 ZNF815PA8K554 130 aa8.44□□□□□ -1.06
CNOT4-204ENST00000414802 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 RPL18AQ02543 176 aaKnown RBP8.43□□□□□ -1.06
CNOT4-204ENST00000414802 GCSHP23434 173 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 PFN2P35080 140 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 C12orf57Q99622 126 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
CNOT4-204ENST00000414802 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
CNOT4-204ENST00000414802 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
CNOT4-204ENST00000414802 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
CNOT4-204ENST00000414802 A0A096LNI7 61 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 HERV-K104P63124 156 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 SFTA2Q6UW10 78 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 Q6ZRP5 223 aa8.41□□□□□ -1.06
CNOT4-204ENST00000414802 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
CNOT4-204ENST00000414802 PANO1I0J062 215 aa8.4□□□□□ -1.06
CNOT4-204ENST00000414802 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
CNOT4-204ENST00000414802 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
CNOT4-204ENST00000414802 BIRC6Q9NR09 4857 aa8.4□□□□□ -1.06
CNOT4-204ENST00000414802 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.07
CNOT4-204ENST00000414802 C14orf144Q96I85 54 aa8.4□□□□□ -1.07
CNOT4-204ENST00000414802 RYR1P21817 5038 aa8.4□□□□□ -1.07
CNOT4-204ENST00000414802 LINC00158P58513 81 aa8.39□□□□□ -1.07
CNOT4-204ENST00000414802 DAND5Q8N907 189 aa8.39□□□□□ -1.07
CNOT4-204ENST00000414802 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-204ENST00000414802 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
CNOT4-204ENST00000414802 COX8AP10176 69 aa8.38□□□□□ -1.07
CNOT4-204ENST00000414802 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
CNOT4-204ENST00000414802 S100A12P80511 92 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 HAMPP81172 84 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 FAM30AQ9NZY2 134 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 MIR7-3HGQ8N6C7 128 aa8.37□□□□□ -1.07
CNOT4-204ENST00000414802 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
CNOT4-204ENST00000414802 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
CNOT4-204ENST00000414802 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
CNOT4-204ENST00000414802 NPC2P61916 151 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 COX17Q14061 63 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 LITAFQ99732 161 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 HSPG2P98160 4391 aa8.35□□□□□ -1.07
CNOT4-204ENST00000414802 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
CNOT4-204ENST00000414802 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
CNOT4-204ENST00000414802 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
CNOT4-204ENST00000414802 FAM168BA1KXE4 195 aa8.34□□□□□ -1.08
CNOT4-204ENST00000414802 Q6ZSA8 131 aa8.34□□□□□ -1.08
CNOT4-204ENST00000414802 PRO1933Q9H354 126 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms