RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 IGKV3OR2-268A0A0C4DH90 116 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 SNCGO76070 127 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 C11orf45Q8TAV5 145 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 LYSTQ99698 3801 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
LINC00330-201ENST00000414562 IGLV4-60A0A075B6I1 120 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 LINC00242Q5T6M2 205 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 TSPEAR-AS2P59090 65 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
LINC00330-201ENST00000414562 COX6A2Q02221 97 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 TRAV8-3A0A0A6YYJ7 113 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 HIST1H4GQ99525 98 aa7.78□□□□□ -1.16
LINC00330-201ENST00000414562 IGLV5-45A0A087WSX0 123 aa7.77□□□□□ -1.17
LINC00330-201ENST00000414562 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
LINC00330-201ENST00000414562 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
LINC00330-201ENST00000414562 C9orf153Q5TBE3 101 aa7.77□□□□□ -1.17
LINC00330-201ENST00000414562 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
LINC00330-201ENST00000414562 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 LELP1Q5T871 98 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 RAB37Q96AX2 223 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 H3BNG1 76 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
LINC00330-201ENST00000414562 OXTP01178 125 aa7.75□□□□□ -1.17
LINC00330-201ENST00000414562 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00330-201ENST00000414562 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
LINC00330-201ENST00000414562 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
LINC00330-201ENST00000414562 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 UQCRQO14949 82 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 CEND1Q8N111 149 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 ANGP03950 147 aaKnown RBP7.74□□□□□ -1.17
LINC00330-201ENST00000414562 CD164Q04900 197 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 SS18Q15532 418 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 CLPSL2Q6UWE3 100 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
LINC00330-201ENST00000414562 LINC00959A0A1B0GUT2 108 aa7.73□□□□□ -1.17
LINC00330-201ENST00000414562 DPH3Q96FX2 82 aa7.73□□□□□ -1.17
LINC00330-201ENST00000414562 CARD19Q96LW7 228 aa7.73□□□□□ -1.17
LINC00330-201ENST00000414562 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
LINC00330-201ENST00000414562 LINC00269Q8N2A0 174 aa7.73□□□□□ -1.17
LINC00330-201ENST00000414562 SMIM1B2RUZ4 78 aa7.72□□□□□ -1.17
LINC00330-201ENST00000414562 FXYD2P54710 66 aa7.72□□□□□ -1.17
LINC00330-201ENST00000414562 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.17
LINC00330-201ENST00000414562 Q8N3U1 123 aa7.71□□□□□ -1.17
LINC00330-201ENST00000414562 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
LINC00330-201ENST00000414562 XCL1P47992 114 aa7.71□□□□□ -1.18
LINC00330-201ENST00000414562 TMEM258P61165 79 aa7.71□□□□□ -1.18
LINC00330-201ENST00000414562 REG3AQ06141 175 aa7.7□□□□□ -1.18
LINC00330-201ENST00000414562 C5orf38Q86SI9 138 aa7.7□□□□□ -1.18
LINC00330-201ENST00000414562 TEN1Q86WV5 123 aa7.7□□□□□ -1.18
LINC00330-201ENST00000414562 IGHV3OR16-9A0A0B4J2B5 98 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 NDUFA1O15239 70 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 PFN2P35080 140 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
LINC00330-201ENST00000414562 CRYGAP11844 174 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
LINC00330-201ENST00000414562 A0A087WZ39 114 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 IGLL5B9A064 214 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 IGHV3-30P01768 117 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 IGHV3-33P01772 117 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 IGHV3-30-5P0DP03 117 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 ESRGQ1W209 222 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 COX7B2Q8TF08 81 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 Q9H8V8 135 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 KLK12Q9UKR0 248 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 IGLV10-54A0A075B6I4 117 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 C15orf53Q8NAA6 179 aa7.68□□□□□ -1.18
LINC00330-201ENST00000414562 CHCHD10Q8WYQ3 142 aaPredicted RBP7.68□□□□□ -1.18
LINC00330-201ENST00000414562 CIRBPQ14011 172 aaKnown RBP7.67□□□□□ -1.18
LINC00330-201ENST00000414562 WFDC10BQ8IUB3 73 aa7.67□□□□□ -1.18
LINC00330-201ENST00000414562 K7ERJ3 54 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 PRSS2P07478 247 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
LINC00330-201ENST00000414562 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
LINC00330-201ENST00000414562 CD164L2Q6UWJ8 174 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
LINC00330-201ENST00000414562 COX7A2LO14548 114 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 CRPP02741 224 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 APLNQ9ULZ1 77 aa7.66□□□□□ -1.18
LINC00330-201ENST00000414562 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.18
LINC00330-201ENST00000414562 KMT2AQ03164 3969 aa7.65□□□□□ -1.18
LINC00330-201ENST00000414562 ANKRD29Q8N6D5 301 aa7.65□□□□□ -1.18
LINC00330-201ENST00000414562 KLK5Q9Y337 293 aaPredicted RBP7.65□□□□□ -1.18
LINC00330-201ENST00000414562 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
LINC00330-201ENST00000414562 TIMM17BO60830 172 aa7.64□□□□□ -1.19
LINC00330-201ENST00000414562 NDUFC2O95298 119 aa7.64□□□□□ -1.19
LINC00330-201ENST00000414562 LYRM7Q5U5X0 104 aa7.64□□□□□ -1.19
LINC00330-201ENST00000414562 MUSTN1Q8IVN3 82 aa7.64□□□□□ -1.19
LINC00330-201ENST00000414562 MUC7Q8TAX7 377 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms