RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
LINC00343-201ENST00000414368 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 CD164L2Q6UWJ8 174 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 Q6ZN92 141 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 C5orf38Q86SI9 138 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 C15orf56Q8N910 161 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 CHCHD1Q96BP2 118 aaKnown RBP4.45□□□□□ -1.7
LINC00343-201ENST00000414368 LINC00526Q96FQ7 95 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 TIMM17AQ99595 171 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 IGHV3OR16-9A0A0B4J2B5 98 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 HSBP1O75506 76 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 NDUFA6P56556 154 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 HIGD2BQ4VC39 106 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
LINC00343-201ENST00000414368 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
LINC00343-201ENST00000414368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
LINC00343-201ENST00000414368 COX7A2LO14548 114 aa4.43□□□□□ -1.7
LINC00343-201ENST00000414368 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
LINC00343-201ENST00000414368 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
LINC00343-201ENST00000414368 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
LINC00343-201ENST00000414368 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 GVQW2A0A096LPI5 108 aaPredicted RBP4.42□□□□□ -1.7
LINC00343-201ENST00000414368 LINC01549A6NIU2 74 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 ATP5LO75964 103 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 FABP4P15090 132 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 PMVKQ15126 192 aa4.42□□□□□ -1.7
LINC00343-201ENST00000414368 DNAH8Q96JB1 4490 aa4.41□□□□□ -1.7
LINC00343-201ENST00000414368 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
LINC00343-201ENST00000414368 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
LINC00343-201ENST00000414368 IFI27L1Q96BM0 104 aa4.41□□□□□ -1.7
LINC00343-201ENST00000414368 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
LINC00343-201ENST00000414368 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
LINC00343-201ENST00000414368 IGLV4-69A0A075B6H9 119 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 A0A087WZ39 114 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 H0Y8G0 127 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 LEPROTL1O95214 131 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.71
LINC00343-201ENST00000414368 TINCRA0A1B0GVN0 87 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 APOMO95445 188 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
LINC00343-201ENST00000414368 HERVK_113P63121 156 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 SEC11AP67812 179 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 HAMPP81172 84 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 HSPG2P98160 4391 aa4.39□□□□□ -1.71
LINC00343-201ENST00000414368 C11orf86A6NJI1 115 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 SPINK8P0C7L1 97 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 SYCNQ0VAF6 134 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
LINC00343-201ENST00000414368 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 SDIM1Q6ZPB5 146 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 Q6ZRU5 148 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 OR10D4PQ8NGN7 298 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
LINC00343-201ENST00000414368 TOMM7Q9P0U1 55 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
LINC00343-201ENST00000414368 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
LINC00343-201ENST00000414368 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
LINC00343-201ENST00000414368 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 PANO1I0J062 215 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 CHTF8P0CG12 524 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
LINC00343-201ENST00000414368 XGP55808 180 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 LINC01561Q8N1V8 128 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 PACRGQ96M98 296 aaPredicted RBP4.37□□□□□ -1.71
LINC00343-201ENST00000414368 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 FAT1Q14517 4588 aa4.37□□□□□ -1.71
LINC00343-201ENST00000414368 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
LINC00343-201ENST00000414368 F8VRH5 84 aa4.36□□□□□ -1.71
LINC00343-201ENST00000414368 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
LINC00343-201ENST00000414368 TMEM170BQ5T4T1 132 aa4.36□□□□□ -1.71
LINC00343-201ENST00000414368 MAP1LC3CQ9BXW4 147 aa4.36□□□□□ -1.71
LINC00343-201ENST00000414368 RYR1P21817 5038 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 H3BRM9 83 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 SYS1-DBNDD2H3BUS1 97 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 NDUFA1O15239 70 aa4.35□□□□□ -1.71
LINC00343-201ENST00000414368 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms