RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ODF1Q14990 250 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 C9orf163Q8N9P6 203 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 DPH3Q96FX2 82 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 SYS1-DBNDD2H3BUS1 97 aa6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
HLA-DMB-257ENST00000414017 IGKV2-24A0A0C4DH68 120 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 DPM2O94777 84 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 IGKCP01834 107 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 C3orf79P0CE67 100 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 Q8IZM0 81 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
HLA-DMB-257ENST00000414017 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
HLA-DMB-257ENST00000414017 PLNP26678 52 aa6.72□□□□□ -1.33
HLA-DMB-257ENST00000414017 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
HLA-DMB-257ENST00000414017 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
HLA-DMB-257ENST00000414017 TMEM223A0PJW6 202 aa6.71□□□□□ -1.34
HLA-DMB-257ENST00000414017 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
HLA-DMB-257ENST00000414017 PET117Q6UWS5 81 aa6.71□□□□□ -1.34
HLA-DMB-257ENST00000414017 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
HLA-DMB-257ENST00000414017 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 C20orf202A1L168 122 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 F8WDY8 70 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 HERVK_113P61574 105 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
HLA-DMB-257ENST00000414017 HSPG2P98160 4391 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 A0A096LNI7 61 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 IGLV5-39A0A0G2JS06 123 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 CXCL5P42830 114 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.69□□□□□ -1.34
HLA-DMB-257ENST00000414017 PANO1I0J062 215 aa6.68□□□□□ -1.34
HLA-DMB-257ENST00000414017 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
HLA-DMB-257ENST00000414017 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
HLA-DMB-257ENST00000414017 ATOH7Q8N100 152 aa6.68□□□□□ -1.34
HLA-DMB-257ENST00000414017 C5orf52A6NGY3 159 aa6.67□□□□□ -1.34
HLA-DMB-257ENST00000414017 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
HLA-DMB-257ENST00000414017 XGP55808 180 aa6.67□□□□□ -1.34
HLA-DMB-257ENST00000414017 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
HLA-DMB-257ENST00000414017 RYR1P21817 5038 aa6.67□□□□□ -1.34
HLA-DMB-257ENST00000414017 LEPROTO15243 131 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 PFN2P35080 140 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 PTTG1IPP53801 180 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 Q6ZRP5 223 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 STPG4Q8N801 248 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
HLA-DMB-257ENST00000414017 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
HLA-DMB-257ENST00000414017 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.34
HLA-DMB-257ENST00000414017 Q6ZSA8 131 aa6.65□□□□□ -1.34
HLA-DMB-257ENST00000414017 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
HLA-DMB-257ENST00000414017 PLEKHB2Q96CS7 222 aa6.65□□□□□ -1.34
HLA-DMB-257ENST00000414017 A0A087WYN8 130 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 J3QQQ9 107 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 SCGB1D1O95968 90 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
HLA-DMB-257ENST00000414017 TLX1NBP0CAT3 122 aa6.63□□□□□ -1.35
HLA-DMB-257ENST00000414017 LINC00158P58513 81 aa6.63□□□□□ -1.35
HLA-DMB-257ENST00000414017 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
HLA-DMB-257ENST00000414017 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
HLA-DMB-257ENST00000414017 E9PLD3 99 aa6.62□□□□□ -1.35
HLA-DMB-257ENST00000414017 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
HLA-DMB-257ENST00000414017 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
HLA-DMB-257ENST00000414017 FAT1Q14517 4588 aa6.62□□□□□ -1.35
HLA-DMB-257ENST00000414017 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
HLA-DMB-257ENST00000414017 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
HLA-DMB-257ENST00000414017 NMUP48645 174 aa6.61□□□□□ -1.35
HLA-DMB-257ENST00000414017 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
HLA-DMB-257ENST00000414017 XP32Q5T750 250 aa6.61□□□□□ -1.35
HLA-DMB-257ENST00000414017 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 AKR1D1P51857 326 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 HERV-K104P63124 156 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 C9orf129Q5T035 196 aaKnown RBP6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 HERC2O95714 4834 aa6.6□□□□□ -1.35
HLA-DMB-257ENST00000414017 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
HLA-DMB-257ENST00000414017 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
HLA-DMB-257ENST00000414017 ZNF815PA8K554 130 aa6.58□□□□□ -1.36
HLA-DMB-257ENST00000414017 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms