RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CHD7Q9P2D1 2997 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 ZDBF2Q9HCK1 2354 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 TDRD15B5MCY1 1934 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 NUP210Q8TEM1 1887 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 FREM2Q5SZK8 3169 aa3.63□□□□□ -1.83
R3HDM1-204ENST00000410054 KLLNB2CW77 178 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 PATE3B3GLJ2 98 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 ODF3L2Q3SX64 289 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 CDKN2A-AS1Q9UH64 79 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 KIF26BQ2KJY2 2108 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 ANAPC1Q9H1A4 1944 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 FHL1Q13642 323 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00322Q6ZN03 302 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 Q6ZTI0 123 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 C18orf65Q6ZTR6 163 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 PLXNA3P51805 1871 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 H3BRN7 92 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 K7EQG2 157 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 ANKRD36A6QL64 1941 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 C22orf24Q9Y442 160 aa3.62□□□□□ -1.83
R3HDM1-204ENST00000410054 TRPM7Q96QT4 1865 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 GREB1Q4ZG55 1949 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 A0A096LNJ9 63 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00574Q9H8X3 128 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 KIF26AQ9ULI4 1882 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 C17orf58Q2M2W7 97 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 CIRBP-AS1Q8TBR5 109 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 B4DSR2 109 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 C10orf55Q5SWW7 151 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 AMELXQ99217 191 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
R3HDM1-204ENST00000410054 KLF16Q9BXK1 252 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 ARHGAP21Q5T5U3 1957 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 ZNF462Q96JM2 2506 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 DNAH10OSP0CZ25 163 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 F5P12259 2224 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 TRIP12Q14669 1992 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 TRBV7-4A0A0J9YYF1 115 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 MSMPQ1L6U9 139 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 LINC00114Q6XXX2 140 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 AKAP9Q99996 3911 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 CRIP3Q6Q6R5 217 aa3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 C1orf147Q96MC9 270 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-204ENST00000410054 PTPRQQ9UMZ3 2332 aa3.59□□□□□ -1.83
R3HDM1-204ENST00000410054 Q8NAQ8 132 aa3.59□□□□□ -1.83
R3HDM1-204ENST00000410054 TP53AIP1Q9HCN2 124 aa3.59□□□□□ -1.83
R3HDM1-204ENST00000410054 MYO16Q9Y6X6 1858 aa3.59□□□□□ -1.83
R3HDM1-204ENST00000410054 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
R3HDM1-204ENST00000410054 CD52P31358 61 aa3.59□□□□□ -1.84
R3HDM1-204ENST00000410054 NPBQ8NG41 125 aa3.59□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 COX6B1P14854 86 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 PLXNA4Q9HCM2 1894 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 ZNF469Q96JG9 3925 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 SHANK1Q9Y566 2161 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 FRYQ5TBA9 3013 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 SPINK1P00995 79 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 C1orf137Q5JT78 98 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 DEFB132Q7Z7B7 95 aa3.58□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV2-23P01705 113 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 DEFB114Q30KQ6 69 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 LINC01565O15544 149 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 CCL18P55774 89 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 GPR179Q6PRD1 2367 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 IGIPA6NJ69 53 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 PRLHP81277 87 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 CACNA1HO95180 2353 aa3.57□□□□□ -1.84
R3HDM1-204ENST00000410054 SRRM5B3KS81 715 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 C19orf73Q9NVV2 129 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 Q9Y3F1 56 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 ACACAQ13085 2346 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV4-69A0A075B6H9 119 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV1-51P01701 117 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV2-14P01704 120 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 Q6YL49 198 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 UBE2DNLQ8IWF7 75 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 LINC01006Q8NI28 216 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 KIAA1671Q9BY89 1806 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 VWA8A3KMH1 1905 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV2-11P01706 119 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 CCL3L1P16619 93 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 KRTAP27-1Q3LI81 207 aa3.56□□□□□ -1.84
R3HDM1-204ENST00000410054 CNOT1A5YKK6 2376 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 A0A087X002 238 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 CASP8AP2Q9UKL3 1982 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 NCOA6Q14686 2063 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 IGLV3-12A0A075B6K2 115 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 CCL5P13501 91 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 C7orf33Q8WU49 177 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 CUBNO60494 3623 aa3.55□□□□□ -1.84
R3HDM1-204ENST00000410054 Q6ZPA2 131 aa3.54□□□□□ -1.84
R3HDM1-204ENST00000410054 RNF5Q99942 180 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms