RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 TRAV26-1A0A087WT03 109 aa16.56■□□□□ 0.24
PMS1-205ENST00000409985 MRPL23Q16540 153 aaKnown RBP16.56■□□□□ 0.24
PMS1-205ENST00000409985 GYPEP15421 78 aa16.55■□□□□ 0.24
PMS1-205ENST00000409985 RPL28P46779 137 aaKnown RBP16.55■□□□□ 0.24
PMS1-205ENST00000409985 MIR7-3HGQ8N6C7 128 aa16.54■□□□□ 0.24
PMS1-205ENST00000409985 SS18Q15532 418 aa16.52■□□□□ 0.24
PMS1-205ENST00000409985 CRPP02741 224 aa16.52■□□□□ 0.23
PMS1-205ENST00000409985 TOMM7Q9P0U1 55 aa16.52■□□□□ 0.23
PMS1-205ENST00000409985 SND1-IT1Q9HBX3 110 aa16.51■□□□□ 0.23
PMS1-205ENST00000409985 CKS1BP61024 79 aa16.5■□□□□ 0.23
PMS1-205ENST00000409985 Q6Q795 121 aa16.5■□□□□ 0.23
PMS1-205ENST00000409985 IGKV3OR2-268A0A0C4DH90 116 aa16.49■□□□□ 0.23
PMS1-205ENST00000409985 LINC00158P58513 81 aa16.49■□□□□ 0.23
PMS1-205ENST00000409985 WFDC9Q8NEX5 89 aa16.49■□□□□ 0.23
PMS1-205ENST00000409985 APOC4P55056 127 aa16.48■□□□□ 0.23
PMS1-205ENST00000409985 Q8IZM0 81 aa16.48■□□□□ 0.23
PMS1-205ENST00000409985 SNCGO76070 127 aa16.47■□□□□ 0.23
PMS1-205ENST00000409985 ACYP1P07311 99 aa16.47■□□□□ 0.23
PMS1-205ENST00000409985 IGKV2-28A0A075B6P5 120 aa16.46■□□□□ 0.23
PMS1-205ENST00000409985 PAX4O43316 350 aa16.46■□□□□ 0.23
PMS1-205ENST00000409985 IGKV2D-28P01615 120 aa16.46■□□□□ 0.23
PMS1-205ENST00000409985 C5orf38Q86SI9 138 aa16.46■□□□□ 0.23
PMS1-205ENST00000409985 CCL18P55774 89 aa16.46■□□□□ 0.22
PMS1-205ENST00000409985 LINC00337Q8N6G1 96 aa16.45■□□□□ 0.22
PMS1-205ENST00000409985 C6orf226Q5I0X4 101 aa16.44■□□□□ 0.22
PMS1-205ENST00000409985 MGAM2Q2M2H8 2515 aa16.44■□□□□ 0.22
PMS1-205ENST00000409985 H0YGX0 51 aa16.44■□□□□ 0.22
PMS1-205ENST00000409985 GAGE2BQ13066 116 aa16.41■□□□□ 0.22
PMS1-205ENST00000409985 GAGE2EQ4V326 116 aa16.41■□□□□ 0.22
PMS1-205ENST00000409985 GAGE2DQ9UEU5 116 aa16.41■□□□□ 0.22
PMS1-205ENST00000409985 BAALC-AS2P0C853 105 aa16.4■□□□□ 0.22
PMS1-205ENST00000409985 NBEAL1Q6ZS30 2694 aa16.4■□□□□ 0.22
PMS1-205ENST00000409985 DNAH3Q8TD57 4116 aa16.4■□□□□ 0.22
PMS1-205ENST00000409985 MIFP14174 115 aa16.39■□□□□ 0.22
PMS1-205ENST00000409985 CXCL5P42830 114 aa16.39■□□□□ 0.22
PMS1-205ENST00000409985 CD164L2Q6UWJ8 174 aa16.39■□□□□ 0.21
PMS1-205ENST00000409985 C15orf53Q8NAA6 179 aa16.39■□□□□ 0.21
PMS1-205ENST00000409985 XCL1P47992 114 aa16.38■□□□□ 0.21
PMS1-205ENST00000409985 OXLD1Q5BKU9 147 aa16.38■□□□□ 0.21
PMS1-205ENST00000409985 FAM218AQ96MZ4 157 aa16.38■□□□□ 0.21
PMS1-205ENST00000409985 NOTCH1P46531 2555 aa16.38■□□□□ 0.21
PMS1-205ENST00000409985 COX17Q14061 63 aa16.37■□□□□ 0.21
PMS1-205ENST00000409985 SMIM11BQ8TCY0 68 aa16.37■□□□□ 0.21
PMS1-205ENST00000409985 WIPF1O43516 503 aa16.37■□□□□ 0.21
PMS1-205ENST00000409985 IGHV4-28A0A0C4DH34 117 aa16.36■□□□□ 0.21
PMS1-205ENST00000409985 DAD1P61803 113 aa16.36■□□□□ 0.21
PMS1-205ENST00000409985 ATP5G1P05496 136 aa16.35■□□□□ 0.21
PMS1-205ENST00000409985 PFN2P35080 140 aa16.35■□□□□ 0.21
PMS1-205ENST00000409985 DEFB135Q30KP9 77 aa16.35■□□□□ 0.21
PMS1-205ENST00000409985 INAFM2P0DMQ5 153 aa16.35■□□□□ 0.21
PMS1-205ENST00000409985 Q8NAQ8 132 aa16.33■□□□□ 0.21
PMS1-205ENST00000409985 C22orf24Q9Y442 160 aa16.33■□□□□ 0.2
PMS1-205ENST00000409985 NDUFC2O95298 119 aa16.32■□□□□ 0.2
PMS1-205ENST00000409985 MALP21145 153 aa16.32■□□□□ 0.2
PMS1-205ENST00000409985 KIAA0087Q14695 138 aa16.32■□□□□ 0.2
PMS1-205ENST00000409985 LINC00269Q8N2A0 174 aa16.31■□□□□ 0.2
PMS1-205ENST00000409985 MUC7Q8TAX7 377 aa16.31■□□□□ 0.2
PMS1-205ENST00000409985 SPART-AS1P0CW21 52 aa16.31■□□□□ 0.2
PMS1-205ENST00000409985 DNAL4O96015 105 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 REG3AQ06141 175 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 CHCHD10Q8WYQ3 142 aaPredicted RBP16.29■□□□□ 0.2
PMS1-205ENST00000409985 A0A096LPF7 62 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 TRBV7-7A0A0K0K1E9 115 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 SDIM1Q6ZPB5 146 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 ANAPC13Q9BS18 74 aa16.29■□□□□ 0.2
PMS1-205ENST00000409985 KRTAP10-11P60412 298 aa16.28■□□□□ 0.2
PMS1-205ENST00000409985 CFAP161Q6P656 301 aa16.28■□□□□ 0.2
PMS1-205ENST00000409985 IMUPQ9GZP8 106 aa16.28■□□□□ 0.2
PMS1-205ENST00000409985 A0A1B0GX51 115 aa16.27■□□□□ 0.2
PMS1-205ENST00000409985 LELP1Q5T871 98 aa16.27■□□□□ 0.2
PMS1-205ENST00000409985 TTC32Q5I0X7 151 aa16.27■□□□□ 0.19
PMS1-205ENST00000409985 ANGP03950 147 aaKnown RBP16.26■□□□□ 0.19
PMS1-205ENST00000409985 NDUFV3P56181 108 aaKnown RBP16.26■□□□□ 0.19
PMS1-205ENST00000409985 CLPSL2Q6UWE3 100 aa16.25■□□□□ 0.19
PMS1-205ENST00000409985 KLK5Q9Y337 293 aaPredicted RBP16.25■□□□□ 0.19
PMS1-205ENST00000409985 EGFEM1PQ0D2K5 195 aa16.24■□□□□ 0.19
PMS1-205ENST00000409985 OR13C6PQ8NH95 151 aa16.24■□□□□ 0.19
PMS1-205ENST00000409985 OBSCN-AS1Q96MR7 158 aa16.24■□□□□ 0.19
PMS1-205ENST00000409985 A0A087WYN8 130 aa16.23■□□□□ 0.19
PMS1-205ENST00000409985 LINC00643Q86TS7 51 aa16.23■□□□□ 0.19
PMS1-205ENST00000409985 CELA1Q9UNI1 258 aa16.23■□□□□ 0.19
PMS1-205ENST00000409985 DEFB4AO15263 64 aa16.22■□□□□ 0.19
PMS1-205ENST00000409985 C11orf68Q9H3H3 251 aaKnown RBP16.22■□□□□ 0.19
PMS1-205ENST00000409985 Q9HAA7 133 aa16.22■□□□□ 0.19
PMS1-205ENST00000409985 PRR34Q9NV39 138 aa16.2■□□□□ 0.18
PMS1-205ENST00000409985 NHLRC4P0CG21 123 aaPredicted RBP16.2■□□□□ 0.18
PMS1-205ENST00000409985 LINC00167Q96N53 147 aa16.2■□□□□ 0.18
PMS1-205ENST00000409985 TMEM126AQ9H061 195 aa16.2■□□□□ 0.18
PMS1-205ENST00000409985 IGHV4-30-4P0DP06 118 aa16.18■□□□□ 0.18
PMS1-205ENST00000409985 LECT2O14960 151 aa16.17■□□□□ 0.18
PMS1-205ENST00000409985 A0A0J9YWU9 116 aa16.16■□□□□ 0.18
PMS1-205ENST00000409985 H3BNG1 76 aa16.16■□□□□ 0.18
PMS1-205ENST00000409985 PRB2P02812 416 aaPredicted RBP16.16■□□□□ 0.18
PMS1-205ENST00000409985 KPRPQ5T749 579 aaPredicted RBP16.16■□□□□ 0.18
PMS1-205ENST00000409985 NANOS2P60321 138 aaKnown RBP16.15■□□□□ 0.18
PMS1-205ENST00000409985 ORMDL1Q9P0S3 153 aa16.14■□□□□ 0.17
PMS1-205ENST00000409985 IGLV10-54A0A075B6I4 117 aa16.14■□□□□ 0.17
PMS1-205ENST00000409985 Q8N3U1 123 aa16.12■□□□□ 0.17
PMS1-205ENST00000409985 GVQW2A0A096LPI5 108 aaPredicted RBP16.12■□□□□ 0.17
PMS1-205ENST00000409985 SMCR5Q8TEV8 140 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms