RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
LSM5-203ENST00000409782 SMDT1Q9H4I9 107 aa3.83□□□□□ -1.8
LSM5-203ENST00000409782 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
LSM5-203ENST00000409782 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
LSM5-203ENST00000409782 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
LSM5-203ENST00000409782 TRAV26-2A0A0B4J265 109 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 TRBV6-5A0A0K0K1A5 114 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 A0A1B0GUT8 65 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 UBE2L6O14933 153 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 HLA-DQA1P01909 254 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 APCSP02743 223 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 RPS10P46783 165 aaKnown RBP3.82□□□□□ -1.8
LSM5-203ENST00000409782 PEA15Q15121 130 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 Q5VSD8 79 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 TMEM191AQ9H0A3 160 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 NAT8Q9UHE5 227 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 V9GYV3 84 aa3.82□□□□□ -1.8
LSM5-203ENST00000409782 SDHAF1A6NFY7 115 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 ADIRFQ15847 76 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 RPL39LQ96EH5 51 aaKnown RBP3.81□□□□□ -1.8
LSM5-203ENST00000409782 NAT8BQ9UHF3 227 aa3.81□□□□□ -1.8
LSM5-203ENST00000409782 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
LSM5-203ENST00000409782 IGLV4-60A0A075B6I1 120 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 A0A096LNJ9 63 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 C9JQL5 133 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 I3L3M4 83 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 PPP1R17O96001 155 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 ZNF25P17030 456 aaPredicted RBP3.8□□□□□ -1.8
LSM5-203ENST00000409782 HAMPP81172 84 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 NUP35Q8NFH5 326 aa3.8□□□□□ -1.8
LSM5-203ENST00000409782 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 SMIM27A0A1W2PRY6 76 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 S100A8P05109 93 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 FGF6P10767 208 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 RAB14P61106 215 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 PMVKQ15126 192 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
LSM5-203ENST00000409782 AMMECR1LQ6DCA0 310 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 SCXQ7RTU7 201 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 AMN1Q8IY45 258 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 ST20Q9HBF5 79 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 C8orf17Q9NRJ1 99 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 TMEM242Q9NWH2 141 aa3.79□□□□□ -1.8
LSM5-203ENST00000409782 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
LSM5-203ENST00000409782 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.78□□□□□ -1.8
LSM5-203ENST00000409782 A0A1B0GXF2 115 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 IGKV2-29A2NJV5 120 aaPredicted RBP3.78□□□□□ -1.8
LSM5-203ENST00000409782 C7orf77A4D0Y5 90 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 ESDP10768 282 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.8
LSM5-203ENST00000409782 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.8
LSM5-203ENST00000409782 HBBP68871 147 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 BTF3L4Q96K17 158 aa3.78□□□□□ -1.8
LSM5-203ENST00000409782 LINC00862A6NCI5 91 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
LSM5-203ENST00000409782 FCER1GP30273 86 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 SMAGPQ0VAQ4 97 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 FAM104BQ5XKR9 115 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 ATP5L2Q7Z4Y8 100 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 ORAOV1Q8WV07 137 aa3.77□□□□□ -1.81
LSM5-203ENST00000409782 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
LSM5-203ENST00000409782 HERC1Q15751 4861 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
LSM5-203ENST00000409782 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
LSM5-203ENST00000409782 IGKV3OR2-268A0A0C4DH90 116 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 F8W036 122 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 PPBPP02775 128 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 MRPL51Q4U2R6 128 aaKnown RBP3.76□□□□□ -1.81
LSM5-203ENST00000409782 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 C20orf78Q9BR46 151 aa3.76□□□□□ -1.81
LSM5-203ENST00000409782 PKHD1L1Q86WI1 4243 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 TRBV24-1A0A075B6N3 115 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 IGHV3-64A0A075B6Q5 118 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 MT-ND4LP03901 98 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 CKS2P33552 79 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
LSM5-203ENST00000409782 CLLU1Q5K131 121 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 Q5W150 140 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 MRPL54Q6P161 138 aaKnown RBP3.75□□□□□ -1.81
LSM5-203ENST00000409782 SDIM1Q6ZPB5 146 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 TIMM21Q9BVV7 248 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 SMIM2Q9BVW6 85 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 CDC42SE2Q9NRR3 84 aa3.75□□□□□ -1.81
LSM5-203ENST00000409782 ANAPC11Q9NYG5 84 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms