RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C16orf95Q9H693 158 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 CYSLTR1Q9Y271 337 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
HMGB3P18-201ENST00000406327 MYMXA0A1B0GTQ4 84 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 A8MWV9 139 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 I3L3M4 83 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 M0R2P5 195 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 PRM2P04554 102 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 P0DMU3 169 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 FAM231AP0DMU4 169 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 FAM231CP0DMU5 169 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 HTN1P15515 57 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 RHOHQ15669 191 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 ZNF56Q15929 161 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 DEFB104AQ8WTQ1 72 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 TTTY13Q9BZ97 58 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 IGSF10Q6WRI0 2623 aa2.54□□□□□ -2
HMGB3P18-201ENST00000406327 COL12A1Q99715 3063 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 MED13LQ71F56 2210 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 A0A1B0GU33 70 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 C11orf86A6NJI1 115 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 OR11H12B2RN74 326 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 LECT2O14960 151 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 ATP5G1P05496 136 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 SMIM13P0DJ93 91 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 HRES1P13985 223 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 RPL39P62891 51 aaKnown RBP2.53□□□□□ -2
HMGB3P18-201ENST00000406327 CFAP126Q5VTH2 177 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 OR11H2Q8NH07 326 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 ZNF418Q8TF45 676 aaPredicted RBP2.53□□□□□ -2
HMGB3P18-201ENST00000406327 PRADC1Q9BSG0 188 aa2.53□□□□□ -2
HMGB3P18-201ENST00000406327 UBR5O95071 2799 aaPredicted RBP2.53□□□□□ -2
HMGB3P18-201ENST00000406327 IGHV3-73A0A0B4J1V6 119 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 H3BUT2 72 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 K7EP13 123 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 CRYBA4P53673 196 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 FXYD2P54710 66 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 C1orf158Q8N1D5 194 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 DNAJC30Q96LL9 226 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 ABCA2Q9BZC7 2435 aa2.52□□□□□ -2.01
HMGB3P18-201ENST00000406327 SPTBN1Q01082 2364 aaKnown RBP2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 USP9XQ93008 2570 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRBV7-3A0A075B6L6 115 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 A0A1W2PPM0 123 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 ZNF815PA8K554 130 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 K7EP34 96 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 EMP1P54849 157 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 HERVK_113P63121 156 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 C12orf74Q32Q52 190 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 TMEM170BQ5T4T1 132 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 GTF2H5Q6ZYL4 71 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 Q8NAQ8 132 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 RAB37Q96AX2 223 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 AMELXQ99217 191 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 MRPL16Q9NX20 251 aaKnown RBP2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 ZNF462Q96JM2 2506 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 CELSR1Q9NYQ6 3014 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 CACNA1BQ00975 2339 aa2.51□□□□□ -2.01
HMGB3P18-201ENST00000406327 A0A0J9YY99 117 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRBV10-1A0A0K0K1A3 114 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 J3QQQ9 107 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 K7ERJ3 54 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 LEPROTO15243 131 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGHV3-30-3P0DP02 117 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 FABP2P12104 132 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 ZNF22P17026 224 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 MRPS36P82909 103 aaKnown RBP2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 NDUFA11Q86Y39 141 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 OR5A1Q8NGJ0 315 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 TMEM263Q8WUH6 116 aaKnown RBP2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 PLEKHB2Q96CS7 222 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 SMR3AQ99954 134 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 SPANXA1Q9NS26 97 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 NHP2Q9NX24 153 aaKnown RBP2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 UBE2D4Q9Y2X8 147 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 SPCS1Q9Y6A9 102 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 FLNCQ14315 2725 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 USP24Q9UPU5 2620 aa2.5□□□□□ -2.01
HMGB3P18-201ENST00000406327 UTP20O75691 2785 aaKnown RBP2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 ACACBO00763 2458 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 CELSR2Q9HCU4 2923 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRGV1A0A0A0MS02 117 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRAV4A0A0B4J268 109 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 LGALS3P17931 250 aaKnown RBP2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 UBE2D1P51668 147 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 TSPEAR-AS2P59090 65 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 Q6ZTI0 123 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 TIMM21Q9BVV7 248 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 AKAP6Q13023 2319 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 CSMD1Q96PZ7 3565 aa2.49□□□□□ -2.01
HMGB3P18-201ENST00000406327 SPTAN1Q13813 2472 aaKnown RBP2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGHV1-58A0A0C4DH39 117 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms