RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 TRAV12-1A0A0B4J245 112 aa2.2□□□□□ -2.06
HMGB1P13-201ENST00000406019 TRBV10-1A0A0K0K1A3 114 aa2.2□□□□□ -2.06
HMGB1P13-201ENST00000406019 PPP1R17O96001 155 aa2.2□□□□□ -2.06
HMGB1P13-201ENST00000406019 HEATR5BQ9P2D3 2071 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 BCORQ6W2J9 1755 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 NUPR2A6NF83 97 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPINK4O60575 86 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 DNAL4O96015 105 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPINK7P58062 85 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 NREPQ16612 68 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPANXN5Q5MJ07 72 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPACA4Q8TDM5 124 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 ORMDL1Q9P0S3 153 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 LENEPQ9Y5L5 61 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 MDC1Q14676 2089 aaKnown RBP2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 DUOX1Q9NRD9 1551 aa2.19□□□□□ -2.06
HMGB1P13-201ENST00000406019 H3BRN7 92 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 ELOF1P60002 83 aaKnown RBP2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 C1orf137Q5JT78 98 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 SPAG11AQ6PDA7 123 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 WFDC9Q8NEX5 89 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 MRPL36Q9P0J6 103 aaKnown RBP2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 PI4KAP42356 2102 aa2.18□□□□□ -2.06
HMGB1P13-201ENST00000406019 BAZ2BQ9UIF8 2168 aaKnown RBP2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 TNRC6BQ9UPQ9 1833 aaKnown RBP2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 MYO7AQ13402 2215 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 HIGD1CA8MV81 97 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 M0R135 149 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 TXNDC17Q9BRA2 123 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 MYO7BQ6PIF6 2116 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 TOGARAM1Q9Y4F4 1720 aa2.17□□□□□ -2.06
HMGB1P13-201ENST00000406019 TRAV21A0A0B4J279 112 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 IGKV3OR2-268A0A0C4DH90 116 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 CTXND1A0A1B0GTU2 59 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 FAM74A4Q5TZK3 123 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 OBSCN-AS1Q96MR7 158 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 CR1P17927 2039 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 ZFHX2Q9C0A1 2572 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 NRXN2Q9P2S2 1712 aa2.16□□□□□ -2.06
HMGB1P13-201ENST00000406019 DDX60Q8IY21 1712 aaKnown RBP2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 A0A087WTM6 91 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 LCE6AA0A183 80 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 COX6B1P14854 86 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 CCL18P55774 89 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 FXYD6P3P58550 94 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 CNBPP62633 177 aaKnown RBP2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 AMELXQ99217 191 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 TIMM8BQ9Y5J9 83 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 TET1Q8NFU7 2136 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 TRIOBPQ9H2D6 2365 aa2.15□□□□□ -2.07
HMGB1P13-201ENST00000406019 NCOA6Q14686 2063 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 FN1P02751 2386 aaKnown RBP2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 A0A1B0GUT8 65 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 F8VRH5 84 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 CCL3L1P16619 93 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 SERF2P84101 59 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 PDE6HQ13956 83 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 FXYD3Q14802 87 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 COL4A5P29400 1685 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 FREM3P0C091 2139 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 ZGRF1Q86YA3 2104 aa2.14□□□□□ -2.07
HMGB1P13-201ENST00000406019 BAHCC1Q9P281 2608 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 IGIPA6NJ69 53 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 M0R1W7 72 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 IGLV3-1P01715 115 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 ESPL1Q14674 2120 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 COX7B2Q8TF08 81 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 LRRC37A3O60309 1634 aa2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 KIAA0100Q14667 2235 aaKnown RBP2.13□□□□□ -2.07
HMGB1P13-201ENST00000406019 INTS1Q8N201 2190 aaKnown RBP2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 C4AP0C0L4 1744 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 DNAJC13O75165 2243 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 LINC01546A6NGU7 62 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 I3L3M4 83 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 PIN1P1O15428 100 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 PLNP26678 52 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 ZNF137PP52743 207 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 LINC00322Q6ZN03 302 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 Q86TA4 180 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 SPTBP11277 2137 aa2.12□□□□□ -2.07
HMGB1P13-201ENST00000406019 RTTNQ86VV8 2226 aa2.11□□□□□ -2.07
HMGB1P13-201ENST00000406019 ARL14EPLP0DKL9 152 aa2.11□□□□□ -2.07
HMGB1P13-201ENST00000406019 KRTAP13-1Q8IUC0 172 aa2.11□□□□□ -2.07
HMGB1P13-201ENST00000406019 PATE1Q8WXA2 126 aa2.11□□□□□ -2.07
HMGB1P13-201ENST00000406019 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
HMGB1P13-201ENST00000406019 H0Y9P7 68 aa2.1□□□□□ -2.07
HMGB1P13-201ENST00000406019 RNASE3P12724 160 aaKnown RBP2.1□□□□□ -2.07
HMGB1P13-201ENST00000406019 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
HMGB1P13-201ENST00000406019 KLK9Q9UKQ9 250 aa2.1□□□□□ -2.07
HMGB1P13-201ENST00000406019 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
HMGB1P13-201ENST00000406019 DEFB103AP81534 67 aa2.09□□□□□ -2.07
HMGB1P13-201ENST00000406019 C10orf113Q5VZT2 155 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms