RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
RAPGEF3-204ENST00000405493 C3orf84H3BNL1 204 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 EGFEM1PQ0D2K5 195 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 DHRS4-AS1Q9P1J3 65 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 CCKP06307 115 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 Q8IZM0 81 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 Q6JHZ5 121 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 MDFIQ99750 246 aa8.37□□□□□ -1.07
RAPGEF3-204ENST00000405493 HTTP42858 3142 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 Q6ZQY7 126 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 H3BNG1 76 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 WFDC10BQ8IUB3 73 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 TET2Q6N021 2002 aaPredicted RBP8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 M0QXV9 152 aa8.36□□□□□ -1.07
RAPGEF3-204ENST00000405493 COX6A2Q02221 97 aa8.35□□□□□ -1.07
RAPGEF3-204ENST00000405493 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
RAPGEF3-204ENST00000405493 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
RAPGEF3-204ENST00000405493 MTORP42345 2549 aa8.34□□□□□ -1.07
RAPGEF3-204ENST00000405493 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
RAPGEF3-204ENST00000405493 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
RAPGEF3-204ENST00000405493 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.07
RAPGEF3-204ENST00000405493 CYSRT1A8MQ03 144 aa8.34□□□□□ -1.07
RAPGEF3-204ENST00000405493 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 NDUFC1O43677 76 aa8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
RAPGEF3-204ENST00000405493 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
RAPGEF3-204ENST00000405493 POLQO75417 2590 aa8.32□□□□□ -1.08
RAPGEF3-204ENST00000405493 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
RAPGEF3-204ENST00000405493 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
RAPGEF3-204ENST00000405493 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
RAPGEF3-204ENST00000405493 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 Q6ZSN1 163 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 SVIPQ8NHG7 77 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
RAPGEF3-204ENST00000405493 SETD2Q9BYW2 2564 aaPredicted RBP8.3□□□□□ -1.08
RAPGEF3-204ENST00000405493 AMELXQ99217 191 aa8.3□□□□□ -1.08
RAPGEF3-204ENST00000405493 ANKRD17O75179 2603 aaKnown RBP8.3□□□□□ -1.08
RAPGEF3-204ENST00000405493 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
RAPGEF3-204ENST00000405493 AGRNO00468 2067 aa8.3□□□□□ -1.08
RAPGEF3-204ENST00000405493 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 A0A096LNT2 108 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 SEC61GP60059 68 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
RAPGEF3-204ENST00000405493 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
RAPGEF3-204ENST00000405493 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
RAPGEF3-204ENST00000405493 A0A0U1RQV1 116 aa8.28□□□□□ -1.08
RAPGEF3-204ENST00000405493 A0A087WVE0 104 aa8.27□□□□□ -1.09
RAPGEF3-204ENST00000405493 PRR3P79522 188 aaKnown RBP8.27□□□□□ -1.09
RAPGEF3-204ENST00000405493 WFDC13Q8IUB5 93 aa8.27□□□□□ -1.09
RAPGEF3-204ENST00000405493 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
RAPGEF3-204ENST00000405493 CHD7Q9P2D1 2997 aa8.26□□□□□ -1.09
RAPGEF3-204ENST00000405493 TRBV7-7A0A0K0K1E9 115 aa8.26□□□□□ -1.09
RAPGEF3-204ENST00000405493 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
RAPGEF3-204ENST00000405493 RANBP2P49792 3224 aaKnown RBP8.26□□□□□ -1.09
RAPGEF3-204ENST00000405493 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
RAPGEF3-204ENST00000405493 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
RAPGEF3-204ENST00000405493 TRBV10-3A0A0K0K1G6 114 aa8.25□□□□□ -1.09
RAPGEF3-204ENST00000405493 KLK9Q2XQG4 91 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 FAM19A3Q7Z5A8 133 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 A0A087WYN8 130 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 ACANP16112 2415 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 KIF25-AS1Q9Y6Z4 181 aa8.24□□□□□ -1.09
RAPGEF3-204ENST00000405493 Q8N814 137 aa8.23□□□□□ -1.09
RAPGEF3-204ENST00000405493 V9GYY9 64 aa8.23□□□□□ -1.09
RAPGEF3-204ENST00000405493 X6R8D5 127 aa8.23□□□□□ -1.09
RAPGEF3-204ENST00000405493 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
RAPGEF3-204ENST00000405493 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
RAPGEF3-204ENST00000405493 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
RAPGEF3-204ENST00000405493 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
RAPGEF3-204ENST00000405493 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
RAPGEF3-204ENST00000405493 FAM30AQ9NZY2 134 aa8.22□□□□□ -1.09
RAPGEF3-204ENST00000405493 C1orf137Q5JT78 98 aa8.21□□□□□ -1.09
RAPGEF3-204ENST00000405493 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
RAPGEF3-204ENST00000405493 HECTD1Q9ULT8 2610 aa8.21□□□□□ -1.1
RAPGEF3-204ENST00000405493 ESRGQ1W209 222 aa8.21□□□□□ -1.1
RAPGEF3-204ENST00000405493 K7EIL1 84 aa8.2□□□□□ -1.1
RAPGEF3-204ENST00000405493 PCSK5Q92824 1860 aa8.2□□□□□ -1.1
RAPGEF3-204ENST00000405493 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
RAPGEF3-204ENST00000405493 C16orf90A8MZG2 172 aa8.19□□□□□ -1.1
RAPGEF3-204ENST00000405493 CHD9Q3L8U1 2897 aa8.19□□□□□ -1.1
RAPGEF3-204ENST00000405493 Q8NAQ8 132 aa8.18□□□□□ -1.1
RAPGEF3-204ENST00000405493 MKI67P46013 3256 aaKnown RBP8.18□□□□□ -1.1
RAPGEF3-204ENST00000405493 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
RAPGEF3-204ENST00000405493 LINC00846Q9NV44 126 aa8.18□□□□□ -1.1
RAPGEF3-204ENST00000405493 LINC00315P59091 139 aa8.18□□□□□ -1.1
RAPGEF3-204ENST00000405493 C1orf195Q5TG92 126 aa8.16□□□□□ -1.1
RAPGEF3-204ENST00000405493 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
RAPGEF3-204ENST00000405493 PRYO14603 147 aa8.16□□□□□ -1.1
RAPGEF3-204ENST00000405493 PRR4Q16378 134 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms