RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 GVQW2A0A096LPI5 108 aaPredicted RBP2.63□□□□□ -1.99
RTN4-209ENST00000405240 CCDC179H3BU77 68 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 LINC00158P58513 81 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 C9orf66Q5T8R8 295 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 LYPD5Q6UWN5 251 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 A0A0J9YWU9 116 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 IGHV4-30-4P0DP06 118 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 Q8NDZ9 215 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 CENPEQ02224 2701 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 ANK2Q01484 3957 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 WFDC9Q8NEX5 89 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 Q9HAA7 133 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 POLQO75417 2590 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 C2orf48Q96LS8 159 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 MIFP14174 115 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 C6orf226Q5I0X4 101 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 Q6JHZ5 121 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 Q8N814 137 aa2.62□□□□□ -1.99
RTN4-209ENST00000405240 CHCHD10Q8WYQ3 142 aaPredicted RBP2.62□□□□□ -1.99
RTN4-209ENST00000405240 PAX4O43316 350 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 IGLV6-57P01721 117 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 TOMM7Q9P0U1 55 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 MYO18BQ8IUG5 2567 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 NF1P21359 2839 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 H3BNG1 76 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 J3QKU1 62 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 CCKP06307 115 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 XCL1P47992 114 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 REG3AQ06141 175 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 LELP1Q5T871 98 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 LINC00269Q8N2A0 174 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 PFN2P35080 140 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 APOC4P55056 127 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 SMR3AQ99954 134 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 CELA1Q9UNI1 258 aa2.61□□□□□ -1.99
RTN4-209ENST00000405240 PTPN13Q12923 2485 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 NIPBLQ6KC79 2804 aaeCLIP2.6□□□□□ -1.991e-6■■■□□ 18.2
RTN4-209ENST00000405240 LECT2O14960 151 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 Q8N3U1 123 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 TMEM126AQ9H061 195 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 FLNAP21333 2647 aaKnown RBP2.6□□□□□ -1.99
RTN4-209ENST00000405240 A0A096LPF7 62 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 B5MCH6 92 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 ENHOQ6UWT2 76 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 LINC00575Q6W349 94 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 LINC00846Q9NV44 126 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 LOC110117498A0A087WWA1 95 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 IGKV3OR2-268A0A0C4DH90 116 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 LINC00526Q96FQ7 95 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 ACACBO00763 2458 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 NAV2Q8IVL1 2488 aa2.6□□□□□ -1.99
RTN4-209ENST00000405240 JMJD7-PLA2G4BH0Y9G9 81 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 TMEM256-PLSCR3K7ERE1 68 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 C3orf22Q8N5N4 141 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 C14orf132Q9NPU4 83 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 TRBV7-6A0A0J9YX20 115 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 FAM236AA0A1B0GUQ0 79 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 FAM236BA0A1B0GV22 79 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 DNAL4O96015 105 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 PRR3P79522 188 aaKnown RBP2.59□□□□□ -1.99
RTN4-209ENST00000405240 C10orf25Q5T742 122 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 GAGE2AQ6NT46 116 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 SVIPQ8NHG7 77 aa2.59□□□□□ -1.99
RTN4-209ENST00000405240 TRBV10-3A0A0K0K1G6 114 aa2.59□□□□□ -2
RTN4-209ENST00000405240 NCR3O14931 201 aa2.59□□□□□ -2
RTN4-209ENST00000405240 UQCRQO14949 82 aa2.59□□□□□ -2
RTN4-209ENST00000405240 C6orf223Q8N319 242 aa2.59□□□□□ -2
RTN4-209ENST00000405240 SS18L2Q9UHA2 77 aa2.59□□□□□ -2
RTN4-209ENST00000405240 EPG5Q9HCE0 2579 aa2.59□□□□□ -2
RTN4-209ENST00000405240 ABCA12Q86UK0 2595 aa2.59□□□□□ -2
RTN4-209ENST00000405240 LRRK2Q5S007 2527 aa2.58□□□□□ -2
RTN4-209ENST00000405240 H3BQ85 93 aa2.58□□□□□ -2
RTN4-209ENST00000405240 SPART-AS1P0CW21 52 aa2.58□□□□□ -2
RTN4-209ENST00000405240 CRYGAP11844 174 aa2.58□□□□□ -2
RTN4-209ENST00000405240 DAD1P61803 113 aa2.58□□□□□ -2
RTN4-209ENST00000405240 DEFB135Q30KP9 77 aa2.58□□□□□ -2
RTN4-209ENST00000405240 UPK3BQ9BT76 320 aa2.58□□□□□ -2
RTN4-209ENST00000405240 CREBBPQ92793 2442 aa2.58□□□□□ -2
RTN4-209ENST00000405240 SLPIP03973 132 aa2.58□□□□□ -2
RTN4-209ENST00000405240 COX7CP15954 63 aa2.58□□□□□ -2
RTN4-209ENST00000405240 C9orf116Q5BN46 136 aaPredicted RBP2.58□□□□□ -2
RTN4-209ENST00000405240 ATP5EP2Q5VTU8 51 aa2.58□□□□□ -2
RTN4-209ENST00000405240 CFAP161Q6P656 301 aa2.58□□□□□ -2
RTN4-209ENST00000405240 F8WDY8 70 aa2.58□□□□□ -2
RTN4-209ENST00000405240 ANGP03950 147 aaKnown RBP2.58□□□□□ -2
RTN4-209ENST00000405240 CLPSL2Q6UWE3 100 aa2.58□□□□□ -2
RTN4-209ENST00000405240 UNQ6190/PRO20217Q6UXQ8 127 aa2.58□□□□□ -2
RTN4-209ENST00000405240 Q6ZQT0 140 aa2.58□□□□□ -2
RTN4-209ENST00000405240 NOTCH3Q9UM47 2321 aa2.58□□□□□ -2
RTN4-209ENST00000405240 WNK1Q9H4A3 2382 aa2.58□□□□□ -2
RTN4-209ENST00000405240 CYSRT1A8MQ03 144 aa2.58□□□□□ -2
RTN4-209ENST00000405240 C6orf48Q9UBA6 75 aa2.58□□□□□ -2
RTN4-209ENST00000405240 ATOX1O00244 68 aa2.57□□□□□ -2
RTN4-209ENST00000405240 RPL18AQ02543 176 aaKnown RBP2.57□□□□□ -2
RTN4-209ENST00000405240 EGFEM1PQ0D2K5 195 aa2.57□□□□□ -2
RTN4-209ENST00000405240 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms