RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 FOXA3P55318 350 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 UBE2G1P62253 170 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 LYPD1Q8N2G4 141 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 POM121L12Q8N7R1 296 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 LINC00479Q96M42 142 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 ODF3Q96PU9 254 aa3.55□□□□□ -1.84
HMGB3P7-201ENST00000400214 TRAV13-1A0A0B4J241 112 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 GRIFINA4D1Z8 144 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 NUPR2A6NF83 97 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 H3BMG7 143 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 H3BRM9 83 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 LEPROTO15243 131 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 C3orf79P0CE67 100 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 PYYP10082 97 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 GNG4P50150 75 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 TDRG1Q3Y452 100 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 C5orf17Q8NAS9 161 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 TTTY13Q9BZ97 58 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 ARL2-SNX15V9GYD0 113 aa3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 PLECQ15149 4684 aaKnown RBP3.54□□□□□ -1.84
HMGB3P7-201ENST00000400214 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 C7orf71A4D174 169 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 A6NED7 52 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 A8MWP4 228 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 K7ERJ3 54 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 NUPR1O60356 82 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 NCR2O95944 276 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 FXYD7P58549 80 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 UBE2BP63146 152 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 HBBP68871 147 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 SPINK13Q1W4C9 94 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 BVES-AS1Q5T3Y7 98 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
HMGB3P7-201ENST00000400214 RYR3Q15413 4870 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 LCE6AA0A183 80 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 TMEM223A0PJW6 202 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 K7EP34 96 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 M0R3E3 92 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 DEFB4AO15263 64 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 TCRAP04437 139 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 RNASE4P34096 147 aaKnown RBP3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 HSD52Q0P140 79 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 OR10AG1Q8NH19 301 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 TSKUQ8WUA8 353 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 CHCHD1Q96BP2 118 aaKnown RBP3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 LINC00467Q9BRT7 94 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 AGPAT4-IT1Q9H0P7 198 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 OSTCQ9NRP0 149 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 LENEPQ9Y5L5 61 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 ALMS1Q8TCU4 4167 aa3.52□□□□□ -1.85
HMGB3P7-201ENST00000400214 RYR2Q92736 4967 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 TRAV12-2A0A075B6T6 113 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 F8W1H4 67 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 ARL14EPLP0DKL9 152 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 C18orf32Q8TCD1 76 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
HMGB3P7-201ENST00000400214 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 MUC21A0A0G2JKD1 596 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 MUC21A0A140T8X8 626 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 LECT2O14960 151 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 LEPROTL1O95214 131 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 IGKV2D-40P01614 121 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 GCHFRP30047 84 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 Q6AWC8 147 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 TMEM136Q6ZRR5 245 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 Q6ZTC4 211 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 LINC00612Q8N6U2 182 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 EPDR1Q9UM22 224 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 SPCS1Q9Y6A9 102 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 SACSQ9NZJ4 4579 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
HMGB3P7-201ENST00000400214 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 A8MWV9 139 aa3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 SLC25A20O43772 301 aa3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 PRB4P10163 310 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P7-201ENST00000400214 COX8AP10176 69 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms