RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 A0A087WVE0 104 aa7.91□□□□□ -1.14
CACNA1C-210ENST00000399606 hDV103S1A0JD37 113 aa7.91□□□□□ -1.14
CACNA1C-210ENST00000399606 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
CACNA1C-210ENST00000399606 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
CACNA1C-210ENST00000399606 CACNA1HO95180 2353 aa7.9□□□□□ -1.14
CACNA1C-210ENST00000399606 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
CACNA1C-210ENST00000399606 RNF185Q96GF1 192 aa7.9□□□□□ -1.14
CACNA1C-210ENST00000399606 CEP192Q8TEP8 1941 aa7.9□□□□□ -1.15
CACNA1C-210ENST00000399606 TSHBP01222 138 aa7.9□□□□□ -1.15
CACNA1C-210ENST00000399606 IGLV1-51P01701 117 aa7.9□□□□□ -1.15
CACNA1C-210ENST00000399606 PRR3P79522 188 aaKnown RBP7.9□□□□□ -1.15
CACNA1C-210ENST00000399606 RPL37AP61513 92 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-210ENST00000399606 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
CACNA1C-210ENST00000399606 KRTAP24-1Q3LI83 254 aa7.89□□□□□ -1.15
CACNA1C-210ENST00000399606 DSCAML1Q8TD84 2053 aa7.89□□□□□ -1.15
CACNA1C-210ENST00000399606 MED13LQ71F56 2210 aa7.89□□□□□ -1.15
CACNA1C-210ENST00000399606 PTPN13Q12923 2485 aa7.88□□□□□ -1.15
CACNA1C-210ENST00000399606 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
CACNA1C-210ENST00000399606 EXPH5Q8NEV8 1989 aa7.87□□□□□ -1.15
CACNA1C-210ENST00000399606 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
CACNA1C-210ENST00000399606 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
CACNA1C-210ENST00000399606 RTL8CO15255 209 aa7.87□□□□□ -1.15
CACNA1C-210ENST00000399606 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 NRACQ8N912 160 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 Q8IZM0 81 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 EGFEM1PQ0D2K5 195 aa7.86□□□□□ -1.15
CACNA1C-210ENST00000399606 CRIP1P50238 77 aa7.85□□□□□ -1.15
CACNA1C-210ENST00000399606 LYPD5Q6UWN5 251 aa7.85□□□□□ -1.15
CACNA1C-210ENST00000399606 FREM1Q5H8C1 2179 aa7.85□□□□□ -1.15
CACNA1C-210ENST00000399606 RAI1Q7Z5J4 1906 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-210ENST00000399606 ODF3L2Q3SX64 289 aa7.84□□□□□ -1.15
CACNA1C-210ENST00000399606 MED12LQ86YW9 2145 aa7.84□□□□□ -1.15
CACNA1C-210ENST00000399606 Q8N814 137 aa7.84□□□□□ -1.15
CACNA1C-210ENST00000399606 LRP4O75096 1905 aa7.84□□□□□ -1.15
CACNA1C-210ENST00000399606 A0A087WSZ3 146 aa7.83□□□□□ -1.16
CACNA1C-210ENST00000399606 CHCHD7Q9BUK0 85 aa7.83□□□□□ -1.16
CACNA1C-210ENST00000399606 TANC2Q9HCD6 1990 aa7.83□□□□□ -1.16
CACNA1C-210ENST00000399606 CHTF8P0CG12 524 aa7.83□□□□□ -1.16
CACNA1C-210ENST00000399606 A0A096LNJ9 63 aa7.82□□□□□ -1.16
CACNA1C-210ENST00000399606 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
CACNA1C-210ENST00000399606 SORL1Q92673 2214 aa7.82□□□□□ -1.16
CACNA1C-210ENST00000399606 MOBPQ13875 183 aa7.82□□□□□ -1.16
CACNA1C-210ENST00000399606 ARHGAP21Q5T5U3 1957 aa7.82□□□□□ -1.16
CACNA1C-210ENST00000399606 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
CACNA1C-210ENST00000399606 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
CACNA1C-210ENST00000399606 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
CACNA1C-210ENST00000399606 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
CACNA1C-210ENST00000399606 A0A087WYN8 130 aa7.8□□□□□ -1.16
CACNA1C-210ENST00000399606 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
CACNA1C-210ENST00000399606 SONP18583 2426 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 A8MTW9 85 aa7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 WIPF1O43516 503 aa7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 EML5Q05BV3 1969 aa7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 TET2Q6N021 2002 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
CACNA1C-210ENST00000399606 KIAA1549Q9HCM3 1950 aa7.78□□□□□ -1.16
CACNA1C-210ENST00000399606 A0A0D9SG42 100 aa7.78□□□□□ -1.16
CACNA1C-210ENST00000399606 HIVEP3Q5T1R4 2406 aa7.77□□□□□ -1.16
CACNA1C-210ENST00000399606 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.16
CACNA1C-210ENST00000399606 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.16
CACNA1C-210ENST00000399606 NOTCH2Q04721 2471 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 Q6ZRP5 223 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 LINC00315P59091 139 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 Q8N6K4 173 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
CACNA1C-210ENST00000399606 PRR9Q5T870 116 aa7.76□□□□□ -1.17
CACNA1C-210ENST00000399606 Q8N3U1 123 aa7.76□□□□□ -1.17
CACNA1C-210ENST00000399606 Q96NJ1 140 aa7.76□□□□□ -1.17
CACNA1C-210ENST00000399606 PRR14LQ5THK1 2151 aa7.76□□□□□ -1.17
CACNA1C-210ENST00000399606 IGLV4-60A0A075B6I1 120 aa7.76□□□□□ -1.17
CACNA1C-210ENST00000399606 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 CSNK1G2-AS1Q8NCQ2 148 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 Q6ZRU5 148 aa7.75□□□□□ -1.17
CACNA1C-210ENST00000399606 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
CACNA1C-210ENST00000399606 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
CACNA1C-210ENST00000399606 MUC4Q99102 2169 aa7.74□□□□□ -1.17
CACNA1C-210ENST00000399606 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
CACNA1C-210ENST00000399606 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CACNA1C-210ENST00000399606 F8WDY8 70 aa7.73□□□□□ -1.17
CACNA1C-210ENST00000399606 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
CACNA1C-210ENST00000399606 Q8N2B8 174 aa7.73□□□□□ -1.17
CACNA1C-210ENST00000399606 KLLNB2CW77 178 aa7.72□□□□□ -1.17
CACNA1C-210ENST00000399606 CXCL6P80162 114 aa7.72□□□□□ -1.17
CACNA1C-210ENST00000399606 CUL9Q8IWT3 2517 aa7.72□□□□□ -1.17
CACNA1C-210ENST00000399606 C4orf26Q17RF5 130 aa7.72□□□□□ -1.17
CACNA1C-210ENST00000399606 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
CACNA1C-210ENST00000399606 C9orf92A6NGG3 77 aa7.71□□□□□ -1.17
CACNA1C-210ENST00000399606 IGIPA6NJ69 53 aa7.71□□□□□ -1.17
CACNA1C-210ENST00000399606 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
CACNA1C-210ENST00000399606 M0R2T5 61 aa7.7□□□□□ -1.18
CACNA1C-210ENST00000399606 SMIM1B2RUZ4 78 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms