RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 CDSNQ15517 529 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 FSTL3O95633 263 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 FHL3Q13643 280 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 BDP1A6H8Y1 2624 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 OBSL1O75147 1896 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 PLXNA2O75051 1894 aa7.98□□□□□ -1.13
CACNA1C-208ENST00000399601 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 COX17Q14061 63 aa7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 ANAPC1Q9H1A4 1944 aa7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 PRRC2AP48634 2157 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 AVPP01185 164 aa7.97□□□□□ -1.13
CACNA1C-208ENST00000399601 ZNF575Q86XF7 245 aa7.96□□□□□ -1.13
CACNA1C-208ENST00000399601 ARHGAP21Q5T5U3 1957 aa7.96□□□□□ -1.14
CACNA1C-208ENST00000399601 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
CACNA1C-208ENST00000399601 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
CACNA1C-208ENST00000399601 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
CACNA1C-208ENST00000399601 NOTCH4Q99466 2003 aa7.95□□□□□ -1.14
CACNA1C-208ENST00000399601 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
CACNA1C-208ENST00000399601 C2orf16Q68DN1 1984 aa7.94□□□□□ -1.14
CACNA1C-208ENST00000399601 LINC00313P59037 77 aa7.94□□□□□ -1.14
CACNA1C-208ENST00000399601 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
CACNA1C-208ENST00000399601 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
CACNA1C-208ENST00000399601 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
CACNA1C-208ENST00000399601 Q8IZM0 81 aa7.92□□□□□ -1.14
CACNA1C-208ENST00000399601 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
CACNA1C-208ENST00000399601 HIVEP3Q5T1R4 2406 aa7.91□□□□□ -1.14
CACNA1C-208ENST00000399601 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
CACNA1C-208ENST00000399601 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
CACNA1C-208ENST00000399601 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
CACNA1C-208ENST00000399601 FREM1Q5H8C1 2179 aa7.91□□□□□ -1.14
CACNA1C-208ENST00000399601 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
CACNA1C-208ENST00000399601 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
CACNA1C-208ENST00000399601 IGLV1-40P01703 118 aa7.9□□□□□ -1.15
CACNA1C-208ENST00000399601 COL4A3Q01955 1670 aa7.9□□□□□ -1.15
CACNA1C-208ENST00000399601 CRIP1P50238 77 aa7.9□□□□□ -1.15
CACNA1C-208ENST00000399601 C11orf1Q9H5F2 150 aa7.89□□□□□ -1.15
CACNA1C-208ENST00000399601 PRR9Q5T870 116 aa7.89□□□□□ -1.15
CACNA1C-208ENST00000399601 ACACBO00763 2458 aa7.88□□□□□ -1.15
CACNA1C-208ENST00000399601 SORL1Q92673 2214 aa7.88□□□□□ -1.15
CACNA1C-208ENST00000399601 NCOA6Q14686 2063 aaPredicted RBP7.88□□□□□ -1.15
CACNA1C-208ENST00000399601 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
CACNA1C-208ENST00000399601 CDC42SE2Q9NRR3 84 aa7.88□□□□□ -1.15
CACNA1C-208ENST00000399601 CCDC168Q8NDH2 2452 aa7.87□□□□□ -1.15
CACNA1C-208ENST00000399601 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
CACNA1C-208ENST00000399601 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
CACNA1C-208ENST00000399601 SPG11Q96JI7 2443 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 PCNTO95613 3336 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 DENND4CQ5VZ89 1909 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 CSPG4Q6UVK1 2322 aa7.86□□□□□ -1.15
CACNA1C-208ENST00000399601 Q6ZRU5 148 aa7.85□□□□□ -1.15
CACNA1C-208ENST00000399601 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
CACNA1C-208ENST00000399601 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
CACNA1C-208ENST00000399601 LINC00846Q9NV44 126 aa7.85□□□□□ -1.15
CACNA1C-208ENST00000399601 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
CACNA1C-208ENST00000399601 RTL8CO15255 209 aa7.84□□□□□ -1.15
CACNA1C-208ENST00000399601 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.15
CACNA1C-208ENST00000399601 PLXNB3Q9ULL4 1909 aa7.84□□□□□ -1.15
CACNA1C-208ENST00000399601 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.16
CACNA1C-208ENST00000399601 SPATA3Q8NHX4 192 aa7.83□□□□□ -1.16
CACNA1C-208ENST00000399601 TANC2Q9HCD6 1990 aa7.83□□□□□ -1.16
CACNA1C-208ENST00000399601 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
CACNA1C-208ENST00000399601 P0C879 139 aa7.83□□□□□ -1.16
CACNA1C-208ENST00000399601 LINC00574Q9H8X3 128 aa7.82□□□□□ -1.16
CACNA1C-208ENST00000399601 TRAV22A0A0B4J277 110 aa7.81□□□□□ -1.16
CACNA1C-208ENST00000399601 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
CACNA1C-208ENST00000399601 MUC4Q99102 2169 aa7.81□□□□□ -1.16
CACNA1C-208ENST00000399601 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
CACNA1C-208ENST00000399601 TSPEAR-AS2P59090 65 aa7.8□□□□□ -1.16
CACNA1C-208ENST00000399601 Q6ZQT0 140 aa7.8□□□□□ -1.16
CACNA1C-208ENST00000399601 A8MUN3 132 aa7.79□□□□□ -1.16
CACNA1C-208ENST00000399601 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
CACNA1C-208ENST00000399601 CEP192Q8TEP8 1941 aa7.79□□□□□ -1.16
CACNA1C-208ENST00000399601 ZNF106Q9H2Y7 1883 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-208ENST00000399601 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 DSCR10P59022 87 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 CENPFP49454 3210 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 K7EQZ3 153 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 C8orf17Q9NRJ1 99 aa7.78□□□□□ -1.16
CACNA1C-208ENST00000399601 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 Q6ZRP5 223 aa7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 COA5Q86WW8 74 aa7.77□□□□□ -1.17
CACNA1C-208ENST00000399601 LTBP2Q14767 1821 aa7.76□□□□□ -1.17
CACNA1C-208ENST00000399601 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
CACNA1C-208ENST00000399601 F8WDY8 70 aa7.76□□□□□ -1.17
CACNA1C-208ENST00000399601 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
CACNA1C-208ENST00000399601 TP53AIP1Q9HCN2 124 aa7.76□□□□□ -1.17
CACNA1C-208ENST00000399601 LINC00310P59036 64 aa7.75□□□□□ -1.17
CACNA1C-208ENST00000399601 LINC00315P59091 139 aa7.75□□□□□ -1.17
CACNA1C-208ENST00000399601 PRR14LQ5THK1 2151 aa7.75□□□□□ -1.17
CACNA1C-208ENST00000399601 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms