RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
CYCSP55-201ENST00000399027 C11orf86A6NJI1 115 aa6.67□□□□□ -1.34
CYCSP55-201ENST00000399027 H3BRM9 83 aa6.67□□□□□ -1.34
CYCSP55-201ENST00000399027 PANO1I0J062 215 aa6.67□□□□□ -1.34
CYCSP55-201ENST00000399027 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
CYCSP55-201ENST00000399027 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
CYCSP55-201ENST00000399027 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 LOC107984640A0A0U1RRK4 108 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 PRSS2P07478 247 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 FABP4P15090 132 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 ODF1Q14990 250 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 TOMM7Q9P0U1 55 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 C6orf48Q9UBA6 75 aa6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
CYCSP55-201ENST00000399027 A0A096LNI7 61 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 CHTF8P0CG12 524 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 CXCL5P42830 114 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 HAMPP81172 84 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 C6orf226Q5I0X4 101 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 C2orf82Q6UX34 121 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 COX7B2Q8TF08 81 aa6.65□□□□□ -1.34
CYCSP55-201ENST00000399027 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 CKS1BP61024 79 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 Q8N1X5 172 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 MAP1LC3CQ9BXW4 147 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
CYCSP55-201ENST00000399027 H0Y8G0 127 aa6.63□□□□□ -1.35
CYCSP55-201ENST00000399027 RYR1P21817 5038 aa6.63□□□□□ -1.35
CYCSP55-201ENST00000399027 DNAH8Q96JB1 4490 aa6.63□□□□□ -1.35
CYCSP55-201ENST00000399027 HSPG2P98160 4391 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 A0A087WYN8 130 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 IGKV2-24A0A0C4DH68 120 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 EPM2AB3EWF7 344 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 PLNP26678 52 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 Q6ZRP5 223 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CYCSP55-201ENST00000399027 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
CYCSP55-201ENST00000399027 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
CYCSP55-201ENST00000399027 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
CYCSP55-201ENST00000399027 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
CYCSP55-201ENST00000399027 H3BS24 57 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 DPM2O94777 84 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 IGKCP01834 107 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 STPG4Q8N801 248 aa6.6□□□□□ -1.35
CYCSP55-201ENST00000399027 HERC2O95714 4834 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 C3orf79P0CE67 100 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 Q5VSD8 79 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 PET117Q6UWS5 81 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 HIST3H2BBQ8N257 126 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 PMCHL2Q9BQD1 86 aa6.59□□□□□ -1.35
CYCSP55-201ENST00000399027 ZNF625Q96I27 306 aaPredicted RBP6.58□□□□□ -1.36
CYCSP55-201ENST00000399027 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
CYCSP55-201ENST00000399027 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
CYCSP55-201ENST00000399027 LEPROTO15243 131 aa6.57□□□□□ -1.36
CYCSP55-201ENST00000399027 S100A6P06703 90 aa6.57□□□□□ -1.36
CYCSP55-201ENST00000399027 KRTDAPP60985 99 aa6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 COX17Q14061 63 aa6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 C9orf129Q5T035 196 aaKnown RBP6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
CYCSP55-201ENST00000399027 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
CYCSP55-201ENST00000399027 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
CYCSP55-201ENST00000399027 HERVK_113P61574 105 aa6.55□□□□□ -1.36
CYCSP55-201ENST00000399027 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
CYCSP55-201ENST00000399027 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
CYCSP55-201ENST00000399027 E9PLD3 99 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 S100A2P29034 98 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 TSPEAR-AS2P59090 65 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 HERV-K104P63124 156 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
CYCSP55-201ENST00000399027 FAM168BA1KXE4 195 aa6.53□□□□□ -1.36
CYCSP55-201ENST00000399027 C20orf202A1L168 122 aa6.53□□□□□ -1.36
CYCSP55-201ENST00000399027 J3QQQ9 107 aa6.53□□□□□ -1.36
CYCSP55-201ENST00000399027 C7orf33Q8WU49 177 aa6.53□□□□□ -1.36
CYCSP55-201ENST00000399027 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
CYCSP55-201ENST00000399027 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
CYCSP55-201ENST00000399027 PFN2P35080 140 aa6.52□□□□□ -1.37
CYCSP55-201ENST00000399027 NMUP48645 174 aa6.52□□□□□ -1.37
CYCSP55-201ENST00000399027 AKR1D1P51857 326 aa6.52□□□□□ -1.37
CYCSP55-201ENST00000399027 RPL37AP61513 92 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms