RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 K7EMT4 169 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 PAX4O43316 350 aa10.73□□□□□ -0.69
CYLD-202ENST00000398568 Q96MF0 132 aa10.73□□□□□ -0.69
CYLD-202ENST00000398568 H3BUA1 57 aa10.73□□□□□ -0.69
CYLD-202ENST00000398568 SNURFQ9Y675 71 aa10.72□□□□□ -0.69
CYLD-202ENST00000398568 BCE1O60756 84 aa10.71□□□□□ -0.69
CYLD-202ENST00000398568 F8WEM9 126 aa10.71□□□□□ -0.69
CYLD-202ENST00000398568 IGHV3-53P01767 116 aa10.71□□□□□ -0.7
CYLD-202ENST00000398568 FP248Q71RG6 208 aaPredicted RBP10.71□□□□□ -0.7
CYLD-202ENST00000398568 AKAP9Q99996 3911 aa10.7□□□□□ -0.7
CYLD-202ENST00000398568 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
CYLD-202ENST00000398568 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
CYLD-202ENST00000398568 CCL18P55774 89 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 LY6EQ16553 131 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 COX7B2Q8TF08 81 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 IGHV4-61A0A0C4DH41 118 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 K7EQG2 157 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 RNASE1P07998 156 aaKnown RBP10.69□□□□□ -0.7
CYLD-202ENST00000398568 BLCAPP62952 87 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 RMI2Q96E14 147 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 SMR3AQ99954 134 aa10.69□□□□□ -0.7
CYLD-202ENST00000398568 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
CYLD-202ENST00000398568 TRBV7-6A0A0J9YX20 115 aa10.68□□□□□ -0.7
CYLD-202ENST00000398568 FAM19A3Q7Z5A8 133 aa10.68□□□□□ -0.7
CYLD-202ENST00000398568 TMEM256-PLSCR3K7ERE1 68 aa10.67□□□□□ -0.7
CYLD-202ENST00000398568 SORL1Q92673 2214 aa10.67□□□□□ -0.7
CYLD-202ENST00000398568 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
CYLD-202ENST00000398568 PRM2P04554 102 aa10.66□□□□□ -0.7
CYLD-202ENST00000398568 LINC00474Q9P2X8 69 aa10.66□□□□□ -0.7
CYLD-202ENST00000398568 NDUFC1O43677 76 aa10.66□□□□□ -0.7
CYLD-202ENST00000398568 HAMPP81172 84 aa10.66□□□□□ -0.7
CYLD-202ENST00000398568 SS18Q15532 418 aa10.65□□□□□ -0.7
CYLD-202ENST00000398568 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.7
CYLD-202ENST00000398568 UBE2L6O14933 153 aa10.65□□□□□ -0.7
CYLD-202ENST00000398568 ATP5EP56381 51 aaPredicted RBP10.65□□□□□ -0.7
CYLD-202ENST00000398568 NF1P21359 2839 aa10.64□□□□□ -0.71
CYLD-202ENST00000398568 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
CYLD-202ENST00000398568 AVPP01185 164 aa10.63□□□□□ -0.71
CYLD-202ENST00000398568 C11orf72Q8NBR9 251 aa10.63□□□□□ -0.71
CYLD-202ENST00000398568 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
CYLD-202ENST00000398568 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
CYLD-202ENST00000398568 KRTAP1-3Q8IUG1 177 aa10.62□□□□□ -0.71
CYLD-202ENST00000398568 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
CYLD-202ENST00000398568 TRBV6-4A0A1B0GX49 114 aa10.61□□□□□ -0.71
CYLD-202ENST00000398568 TRAV10A0A0B4J240 114 aa10.61□□□□□ -0.71
CYLD-202ENST00000398568 Q8N814 137 aa10.61□□□□□ -0.71
CYLD-202ENST00000398568 MPLKIPQ8TAP9 179 aa10.6□□□□□ -0.71
CYLD-202ENST00000398568 Q6ZTI0 123 aa10.6□□□□□ -0.71
CYLD-202ENST00000398568 DEFB131AP59861 70 aa10.59□□□□□ -0.71
CYLD-202ENST00000398568 LINC00482Q8N8I6 264 aa10.59□□□□□ -0.71
CYLD-202ENST00000398568 H3BUX3 64 aa10.58□□□□□ -0.72
CYLD-202ENST00000398568 K7EQD1 137 aa10.58□□□□□ -0.72
CYLD-202ENST00000398568 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
CYLD-202ENST00000398568 LMO4P61968 165 aa10.58□□□□□ -0.72
CYLD-202ENST00000398568 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
CYLD-202ENST00000398568 CFHR3Q02985 330 aa10.58□□□□□ -0.72
CYLD-202ENST00000398568 CUBNO60494 3623 aa10.57□□□□□ -0.72
CYLD-202ENST00000398568 MIFP14174 115 aa10.57□□□□□ -0.72
CYLD-202ENST00000398568 LINC00167Q96N53 147 aa10.57□□□□□ -0.72
CYLD-202ENST00000398568 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
CYLD-202ENST00000398568 LAMTOR3Q9UHA4 124 aa10.57□□□□□ -0.72
CYLD-202ENST00000398568 ATRQ13535 2644 aa10.56□□□□□ -0.72
CYLD-202ENST00000398568 LY6G6DO95868 133 aa10.55□□□□□ -0.72
CYLD-202ENST00000398568 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
CYLD-202ENST00000398568 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
CYLD-202ENST00000398568 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
CYLD-202ENST00000398568 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
CYLD-202ENST00000398568 Q6ZVQ6 151 aa10.54□□□□□ -0.72
CYLD-202ENST00000398568 CR1P17927 2039 aa10.53□□□□□ -0.72
CYLD-202ENST00000398568 TRBV10-1A0A0K0K1A3 114 aa10.53□□□□□ -0.72
CYLD-202ENST00000398568 Q8N3U1 123 aa10.53□□□□□ -0.72
CYLD-202ENST00000398568 Q6ZQT0 140 aa10.53□□□□□ -0.72
CYLD-202ENST00000398568 A6NDX4 124 aa10.52□□□□□ -0.73
CYLD-202ENST00000398568 DSCR9P59020 149 aa10.52□□□□□ -0.73
CYLD-202ENST00000398568 MSMBP08118 114 aa10.51□□□□□ -0.73
CYLD-202ENST00000398568 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
CYLD-202ENST00000398568 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
CYLD-202ENST00000398568 INSP01308 110 aa10.51□□□□□ -0.73
CYLD-202ENST00000398568 CXCL6P80162 114 aa10.5□□□□□ -0.73
CYLD-202ENST00000398568 A0A096LNT2 108 aa10.5□□□□□ -0.73
CYLD-202ENST00000398568 B4DSR2 109 aa10.5□□□□□ -0.73
CYLD-202ENST00000398568 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
CYLD-202ENST00000398568 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
CYLD-202ENST00000398568 NREPQ16612 68 aa10.49□□□□□ -0.73
CYLD-202ENST00000398568 TMEM254Q8TBM7 123 aa10.49□□□□□ -0.73
CYLD-202ENST00000398568 LINC01356Q8N9X3 169 aa10.49□□□□□ -0.73
CYLD-202ENST00000398568 LOC110117498A0A087WWA1 95 aa10.48□□□□□ -0.73
CYLD-202ENST00000398568 TRBV7-4A0A0J9YYF1 115 aa10.47□□□□□ -0.73
CYLD-202ENST00000398568 INAFM1C9JVW0 142 aa10.47□□□□□ -0.73
CYLD-202ENST00000398568 IGHV4-38-2P0DP08 117 aa10.47□□□□□ -0.73
CYLD-202ENST00000398568 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
CYLD-202ENST00000398568 ESRGQ1W209 222 aa10.47□□□□□ -0.73
CYLD-202ENST00000398568 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.73
CYLD-202ENST00000398568 PDE6GP18545 87 aa10.46□□□□□ -0.73
CYLD-202ENST00000398568 SCXQ7RTU7 201 aa10.46□□□□□ -0.73
CYLD-202ENST00000398568 A0A087WZ39 114 aa10.46□□□□□ -0.73
CYLD-202ENST00000398568 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms