RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TRAV7A0A075B6U4 112 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 LINC00269Q8N2A0 174 aa4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
TM9SF4-202ENST00000398022 C11orf71Q6IPW1 123 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 ZNF575Q86XF7 245 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 FAM229BQ4G0N7 80 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 ZFP36P26651 326 aaKnown RBP4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 TIMM21Q9BVV7 248 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 MXRA5Q9NR99 2828 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 NDUFA4O00483 81 aa4.72□□□□□ -1.65
TM9SF4-202ENST00000398022 CFC1BP0CG36 223 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 CFC1P0CG37 223 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 USMG5Q96IX5 58 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 RYR3Q15413 4870 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 SYCNQ0VAF6 134 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 C18orf65Q6ZTR6 163 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 C5orf56Q8N8D9 126 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 TMEM141Q96I45 108 aa4.71□□□□□ -1.66
TM9SF4-202ENST00000398022 TMEM223A0PJW6 202 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 H7C423 109 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 ZFAND2AQ8N6M9 145 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 PRR9Q5T870 116 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
TM9SF4-202ENST00000398022 LYSTQ99698 3801 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 H3BUA1 57 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 WNK1Q9H4A3 2382 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 IGKV3-7A0A075B6H7 116 aa4.69□□□□□ -1.66
TM9SF4-202ENST00000398022 IGHV4OR15-8A0A075B7B6 117 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 A0A087WW49 117 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 TRAV12-3A0A0B4J271 114 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 TRBV30A0A0K0K1B3 111 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 ADARB2-AS1A8MUL3 147 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 K7EQD1 137 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 MIFP14174 115 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 LINC00242Q5T6M2 205 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 RHPN1-AS1Q9BWJ2 59 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 C11orf86A6NJI1 115 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 GNRH2O43555 120 aa4.68□□□□□ -1.66
TM9SF4-202ENST00000398022 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 IGHV3-11P01762 117 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 RNF223E7ERA6 249 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 IGHV1-69P01742 117 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 KLHL30-AS1Q8NEE0 82 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 CR1P17927 2039 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 RNASE3P12724 160 aaKnown RBP4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 NANOS2P60321 138 aaKnown RBP4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 CELA1Q9UNI1 258 aa4.67□□□□□ -1.66
TM9SF4-202ENST00000398022 IGHV3OR16-10A0A075B7F0 116 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 A0A0J9YY99 117 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 C16orf90A8MZG2 172 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 SOCS3O14543 225 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 LEPROTO15243 131 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 DNAL4O96015 105 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 FAM74A4Q5TZK3 123 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 POLR2KP53803 58 aaKnown RBP4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 LY6EQ16553 131 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
TM9SF4-202ENST00000398022 TRBV6-5A0A0K0K1A5 114 aa4.65□□□□□ -1.66
TM9SF4-202ENST00000398022 Q6ZRP5 223 aa4.65□□□□□ -1.66
TM9SF4-202ENST00000398022 IGLV4-69A0A075B6H9 119 aa4.65□□□□□ -1.67
TM9SF4-202ENST00000398022 A0A087WVE0 104 aa4.65□□□□□ -1.67
TM9SF4-202ENST00000398022 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.67
TM9SF4-202ENST00000398022 DEFB1P60022 68 aa4.65□□□□□ -1.67
TM9SF4-202ENST00000398022 BRD3OSQ6XYD6 125 aa4.65□□□□□ -1.67
TM9SF4-202ENST00000398022 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 C3orf84H3BNL1 204 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 RPL39P62891 51 aaKnown RBP4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 RMI2Q96E14 147 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV3-64A0A075B6Q5 118 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 H3BUX3 64 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 Q6ZS46 218 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 KIF25-AS1Q9Y6Z4 181 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 CCL19Q99731 98 aa4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 FN1P02751 2386 aaKnown RBP4.64□□□□□ -1.67
TM9SF4-202ENST00000398022 TSHBP01222 138 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 LINC00315P59091 139 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 I3L3M4 83 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 DNAH7Q8WXX0 4024 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 ATRQ13535 2644 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 SND1-IT1Q9HBX3 110 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 FLNAP21333 2647 aaKnown RBP4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 IGHV1OR15-1A0A075B7D0 117 aa4.63□□□□□ -1.67
TM9SF4-202ENST00000398022 TRBV10-3A0A0K0K1G6 114 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms