RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 PANO1I0J062 215 aa16.27■□□□□ 0.19
TMEM55B-202ENST00000398020 ZNF22P17026 224 aaPredicted RBP16.27■□□□□ 0.19
TMEM55B-202ENST00000398020 C10orf25Q5T742 122 aa16.27■□□□□ 0.19
TMEM55B-202ENST00000398020 C2orf82Q6UX34 121 aa16.27■□□□□ 0.19
TMEM55B-202ENST00000398020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.27■□□□□ 0.19
TMEM55B-202ENST00000398020 HERC2O95714 4834 aa16.26■□□□□ 0.19
TMEM55B-202ENST00000398020 UNQ6190/PRO20217Q6UXQ8 127 aa16.26■□□□□ 0.19
TMEM55B-202ENST00000398020 MRPL35Q9NZE8 188 aaKnown RBP16.26■□□□□ 0.19
TMEM55B-202ENST00000398020 NDUFA1O15239 70 aa16.25■□□□□ 0.19
TMEM55B-202ENST00000398020 PRSS2P07478 247 aa16.25■□□□□ 0.19
TMEM55B-202ENST00000398020 CHTF8P0CG12 524 aa16.25■□□□□ 0.19
TMEM55B-202ENST00000398020 H3BRM9 83 aa16.24■□□□□ 0.19
TMEM55B-202ENST00000398020 C6orf226Q5I0X4 101 aa16.24■□□□□ 0.19
TMEM55B-202ENST00000398020 F8VRH5 84 aa16.23■□□□□ 0.19
TMEM55B-202ENST00000398020 TMEM170BQ5T4T1 132 aa16.23■□□□□ 0.19
TMEM55B-202ENST00000398020 Q8IZM0 81 aa16.23■□□□□ 0.19
TMEM55B-202ENST00000398020 ODF1Q14990 250 aa16.22■□□□□ 0.19
TMEM55B-202ENST00000398020 SCXQ7RTU7 201 aa16.22■□□□□ 0.19
TMEM55B-202ENST00000398020 IGKV2-24A0A0C4DH68 120 aa16.21■□□□□ 0.19
TMEM55B-202ENST00000398020 F8WDY8 70 aa16.21■□□□□ 0.18
TMEM55B-202ENST00000398020 CKS1BP61024 79 aa16.21■□□□□ 0.18
TMEM55B-202ENST00000398020 C6orf48Q9UBA6 75 aa16.21■□□□□ 0.18
TMEM55B-202ENST00000398020 A0A096LNI7 61 aa16.2■□□□□ 0.18
TMEM55B-202ENST00000398020 PCP4L1A6NKN8 68 aa16.2■□□□□ 0.18
TMEM55B-202ENST00000398020 S100A12P80511 92 aa16.2■□□□□ 0.18
TMEM55B-202ENST00000398020 COX7B2Q8TF08 81 aa16.2■□□□□ 0.18
TMEM55B-202ENST00000398020 KRTAP17-1Q9BYP8 105 aa16.2■□□□□ 0.18
TMEM55B-202ENST00000398020 CIRBP-AS1Q8TBR5 109 aa16.19■□□□□ 0.18
TMEM55B-202ENST00000398020 PMCHL2Q9BQD1 86 aa16.19■□□□□ 0.18
TMEM55B-202ENST00000398020 MAP1LC3CQ9BXW4 147 aa16.19■□□□□ 0.18
TMEM55B-202ENST00000398020 SMR3BP02814 79 aaPredicted RBP16.18■□□□□ 0.18
TMEM55B-202ENST00000398020 DPH3Q96FX2 82 aa16.18■□□□□ 0.18
TMEM55B-202ENST00000398020 LOC107984640A0A0U1RRK4 108 aa16.17■□□□□ 0.18
TMEM55B-202ENST00000398020 SYS1-DBNDD2H3BUS1 97 aa16.17■□□□□ 0.18
TMEM55B-202ENST00000398020 RNF151Q2KHN1 245 aa16.17■□□□□ 0.18
TMEM55B-202ENST00000398020 C9orf116Q5BN46 136 aaPredicted RBP16.16■□□□□ 0.18
TMEM55B-202ENST00000398020 SPACA4Q8TDM5 124 aa16.16■□□□□ 0.18
TMEM55B-202ENST00000398020 IGLV5-39A0A0G2JS06 123 aa16.15■□□□□ 0.18
TMEM55B-202ENST00000398020 RPL18AQ02543 176 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-202ENST00000398020 GAGE2BQ13066 116 aa16.15■□□□□ 0.18
TMEM55B-202ENST00000398020 CIRBPQ14011 172 aaKnown RBP16.15■□□□□ 0.18
TMEM55B-202ENST00000398020 MAJINQ3KP22 176 aa16.15■□□□□ 0.18
TMEM55B-202ENST00000398020 PKIGQ9Y2B9 76 aa16.14■□□□□ 0.17
TMEM55B-202ENST00000398020 TRBV30A0A0K0K1B3 111 aa16.13■□□□□ 0.17
TMEM55B-202ENST00000398020 PET117Q6UWS5 81 aa16.13■□□□□ 0.17
TMEM55B-202ENST00000398020 TMEM223A0PJW6 202 aa16.12■□□□□ 0.17
TMEM55B-202ENST00000398020 PTTG1IPP53801 180 aa16.12■□□□□ 0.17
TMEM55B-202ENST00000398020 A0A087WYN8 130 aa16.11■□□□□ 0.17
TMEM55B-202ENST00000398020 CXCL5P42830 114 aa16.11■□□□□ 0.17
TMEM55B-202ENST00000398020 DPM2O94777 84 aa16.1■□□□□ 0.17
TMEM55B-202ENST00000398020 PLNP26678 52 aa16.1■□□□□ 0.17
TMEM55B-202ENST00000398020 Q6ZRP5 223 aa16.1■□□□□ 0.17
TMEM55B-202ENST00000398020 Q8N1X5 172 aa16.09■□□□□ 0.17
TMEM55B-202ENST00000398020 C20orf202A1L168 122 aa16.08■□□□□ 0.17
TMEM55B-202ENST00000398020 STPG4Q8N801 248 aa16.08■□□□□ 0.17
TMEM55B-202ENST00000398020 PRO1933Q9H354 126 aa16.08■□□□□ 0.17
TMEM55B-202ENST00000398020 FAT1Q14517 4588 aa16.08■□□□□ 0.17
TMEM55B-202ENST00000398020 LINC01545Q5VT33 79 aa16.08■□□□□ 0.16
TMEM55B-202ENST00000398020 VAMP8Q9BV40 100 aa16.08■□□□□ 0.16
TMEM55B-202ENST00000398020 LINC00474Q9P2X8 69 aa16.08■□□□□ 0.16
TMEM55B-202ENST00000398020 TSTD3H0UI37 97 aa16.07■□□□□ 0.16
TMEM55B-202ENST00000398020 IGKCP01834 107 aa16.07■□□□□ 0.16
TMEM55B-202ENST00000398020 GAGE2EQ4V326 116 aa16.07■□□□□ 0.16
TMEM55B-202ENST00000398020 GAGE2DQ9UEU5 116 aa16.07■□□□□ 0.16
TMEM55B-202ENST00000398020 TLX1NBP0CAT3 122 aa16.06■□□□□ 0.16
TMEM55B-202ENST00000398020 NDUFC2-KCTD14E9PQ53 114 aa16.05■□□□□ 0.16
TMEM55B-202ENST00000398020 ATOH7Q8N100 152 aa16.05■□□□□ 0.16
TMEM55B-202ENST00000398020 KRTAP4-5Q9BYR2 181 aa16.04■□□□□ 0.16
TMEM55B-202ENST00000398020 PLAC8Q9NZF1 115 aa16.04■□□□□ 0.16
TMEM55B-202ENST00000398020 PAM16Q9Y3D7 125 aa16.04■□□□□ 0.16
TMEM55B-202ENST00000398020 LINC00528Q8N1L1 170 aa16.03■□□□□ 0.16
TMEM55B-202ENST00000398020 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.15
TMEM55B-202ENST00000398020 Q5VSD8 79 aa16.01■□□□□ 0.15
TMEM55B-202ENST00000398020 A0A1W2PNN7 141 aa15.99■□□□□ 0.15
TMEM55B-202ENST00000398020 EPM2AB3EWF7 344 aa15.99■□□□□ 0.15
TMEM55B-202ENST00000398020 SPATA45Q537H7 98 aa15.99■□□□□ 0.15
TMEM55B-202ENST00000398020 LINC00587B1AMM8 73 aa15.99■□□□□ 0.15
TMEM55B-202ENST00000398020 FAM168BA1KXE4 195 aa15.98■□□□□ 0.15
TMEM55B-202ENST00000398020 FAM229AH3BQW9 127 aa15.98■□□□□ 0.15
TMEM55B-202ENST00000398020 SRRM2Q9UQ35 2752 aaKnown RBP15.98■□□□□ 0.15
TMEM55B-202ENST00000398020 DDTP30046 118 aa15.97■□□□□ 0.15
TMEM55B-202ENST00000398020 TSPEAR-AS2P59090 65 aa15.97■□□□□ 0.15
TMEM55B-202ENST00000398020 XAGE1AQ9HD64 81 aa15.97■□□□□ 0.15
TMEM55B-202ENST00000398020 PFN2P35080 140 aa15.96■□□□□ 0.15
TMEM55B-202ENST00000398020 HERVK_113P61574 105 aa15.96■□□□□ 0.15
TMEM55B-202ENST00000398020 C9orf129Q5T035 196 aaKnown RBP15.96■□□□□ 0.15
TMEM55B-202ENST00000398020 ABCA13Q86UQ4 5058 aa15.95■□□□□ 0.14
TMEM55B-202ENST00000398020 LEPROTO15243 131 aa15.94■□□□□ 0.14
TMEM55B-202ENST00000398020 ERG28Q9UKR5 140 aa15.94■□□□□ 0.14
TMEM55B-202ENST00000398020 SFTA2Q6UW10 78 aa15.92■□□□□ 0.14
TMEM55B-202ENST00000398020 FAM19A5Q7Z5A7 132 aaPredicted RBP15.92■□□□□ 0.14
TMEM55B-202ENST00000398020 NDUFA12Q9UI09 145 aa15.92■□□□□ 0.14
TMEM55B-202ENST00000398020 PLEKHB2Q96CS7 222 aa15.92■□□□□ 0.14
TMEM55B-202ENST00000398020 VPS13BQ7Z7G8 4022 aa15.91■□□□□ 0.14
TMEM55B-202ENST00000398020 J3QQQ9 107 aa15.91■□□□□ 0.14
TMEM55B-202ENST00000398020 MIEN1Q9BRT3 115 aa15.91■□□□□ 0.14
TMEM55B-202ENST00000398020 HSBP1L1C9JCN9 74 aa15.9■□□□□ 0.14
TMEM55B-202ENST00000398020 PCLOQ9Y6V0 5065 aa15.9■□□□□ 0.14
TMEM55B-202ENST00000398020 KRTAP7-1Q8IUC3 87 aa15.89■□□□□ 0.13
TMEM55B-202ENST00000398020 A0A0U1RRA0 63 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms