RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 CDC42SE2Q9NRR3 84 aa6.55□□□□□ -1.36
TRPM1-202ENST00000397795 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
TRPM1-202ENST00000397795 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
TRPM1-202ENST00000397795 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 CACNA1GO43497 2377 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 CYSRT1A8MQ03 144 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 PRR9Q5T870 116 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 ZNF580Q9UK33 172 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
TRPM1-202ENST00000397795 K7EQG2 157 aa6.53□□□□□ -1.36
TRPM1-202ENST00000397795 LELP1Q5T871 98 aa6.53□□□□□ -1.36
TRPM1-202ENST00000397795 CNOT1A5YKK6 2376 aaKnown RBP6.53□□□□□ -1.36
TRPM1-202ENST00000397795 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
TRPM1-202ENST00000397795 IGKV2-30P06310 120 aa6.53□□□□□ -1.36
TRPM1-202ENST00000397795 EP300Q09472 2414 aaPredicted RBP6.53□□□□□ -1.36
TRPM1-202ENST00000397795 TM2D3Q9BRN9 247 aa6.52□□□□□ -1.36
TRPM1-202ENST00000397795 COA5Q86WW8 74 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 AMELXQ99217 191 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 PRRC2AP48634 2157 aaKnown RBP6.52□□□□□ -1.37
TRPM1-202ENST00000397795 MAPK1IP1LQ8NDC0 245 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 SPTAN1Q13813 2472 aaKnown RBP6.52□□□□□ -1.37
TRPM1-202ENST00000397795 Q5XG85 94 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
TRPM1-202ENST00000397795 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 PROK1P58294 105 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 NOTCH3Q9UM47 2321 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 TMEM105Q8N8V8 129 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
TRPM1-202ENST00000397795 LINC00482Q8N8I6 264 aa6.51□□□□□ -1.37
TRPM1-202ENST00000397795 RIF1Q5UIP0 2472 aaKnown RBP6.5□□□□□ -1.37
TRPM1-202ENST00000397795 C11orf72Q8NBR9 251 aa6.5□□□□□ -1.37
TRPM1-202ENST00000397795 COL4A2P08572 1712 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 DEFB131BA0A096LNP1 70 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 AVPP01185 164 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRPM1-202ENST00000397795 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 LRP4O75096 1905 aa6.49□□□□□ -1.37
TRPM1-202ENST00000397795 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
TRPM1-202ENST00000397795 COL6A6A6NMZ7 2263 aa6.48□□□□□ -1.37
TRPM1-202ENST00000397795 CEP192Q8TEP8 1941 aa6.48□□□□□ -1.37
TRPM1-202ENST00000397795 MED13LQ71F56 2210 aa6.48□□□□□ -1.37
TRPM1-202ENST00000397795 UNQ6190/PRO20217Q6UXQ8 127 aa6.48□□□□□ -1.37
TRPM1-202ENST00000397795 KLLNB2CW77 178 aa6.47□□□□□ -1.37
TRPM1-202ENST00000397795 IGFL3Q6UXB1 125 aa6.47□□□□□ -1.37
TRPM1-202ENST00000397795 LITAFQ99732 161 aa6.47□□□□□ -1.37
TRPM1-202ENST00000397795 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
TRPM1-202ENST00000397795 Q8N2B8 174 aa6.47□□□□□ -1.37
TRPM1-202ENST00000397795 KLKP1Q107X0 134 aa6.46□□□□□ -1.37
TRPM1-202ENST00000397795 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
TRPM1-202ENST00000397795 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
TRPM1-202ENST00000397795 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
TRPM1-202ENST00000397795 H7BZZ5 65 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 C10orf142B7Z368 130 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 GPR179Q6PRD1 2367 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 ZFP36P26651 326 aaKnown RBP6.45□□□□□ -1.38
TRPM1-202ENST00000397795 COX6A2Q02221 97 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 Q6ZQT0 140 aa6.45□□□□□ -1.38
TRPM1-202ENST00000397795 DEFB114Q30KQ6 69 aa6.44□□□□□ -1.38
TRPM1-202ENST00000397795 GRNP28799 593 aaKnown RBP6.44□□□□□ -1.38
TRPM1-202ENST00000397795 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
TRPM1-202ENST00000397795 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
TRPM1-202ENST00000397795 PCNX1Q96RV3 2341 aa6.44□□□□□ -1.38
TRPM1-202ENST00000397795 LINC00315P59091 139 aa6.43□□□□□ -1.38
TRPM1-202ENST00000397795 TTC28Q96AY4 2481 aa6.43□□□□□ -1.38
TRPM1-202ENST00000397795 NUPR2A6NF83 97 aa6.43□□□□□ -1.38
TRPM1-202ENST00000397795 SORL1Q92673 2214 aa6.43□□□□□ -1.38
TRPM1-202ENST00000397795 DSCAMO60469 2012 aa6.42□□□□□ -1.38
TRPM1-202ENST00000397795 ODF3BA8MYP8 253 aa6.42□□□□□ -1.38
TRPM1-202ENST00000397795 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 IGLV5-39A0A0G2JS06 123 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 APLNQ9ULZ1 77 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 C2CD3Q4AC94 2353 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
TRPM1-202ENST00000397795 MOBPQ13875 183 aa6.4□□□□□ -1.39
TRPM1-202ENST00000397795 CSNK1G2-AS1Q8NCQ2 148 aa6.39□□□□□ -1.39
TRPM1-202ENST00000397795 OXTP01178 125 aa6.39□□□□□ -1.39
TRPM1-202ENST00000397795 CYSTM1Q9H1C7 97 aa6.39□□□□□ -1.39
TRPM1-202ENST00000397795 Q8NBF4 154 aa6.38□□□□□ -1.39
TRPM1-202ENST00000397795 A0A0C4DFX4 3053 aa6.37□□□□□ -1.39
TRPM1-202ENST00000397795 IGLV5-45A0A087WSX0 123 aa6.37□□□□□ -1.39
TRPM1-202ENST00000397795 PCSK5Q92824 1860 aa6.36□□□□□ -1.39
TRPM1-202ENST00000397795 LYPD5Q6UWN5 251 aa6.36□□□□□ -1.39
TRPM1-202ENST00000397795 A8MTW9 85 aa6.36□□□□□ -1.39
TRPM1-202ENST00000397795 CDSNQ15517 529 aa6.36□□□□□ -1.39
TRPM1-202ENST00000397795 DEFB113Q30KQ7 82 aa6.36□□□□□ -1.39
TRPM1-202ENST00000397795 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
TRPM1-202ENST00000397795 Q1T7F1 81 aa6.35□□□□□ -1.39
TRPM1-202ENST00000397795 IGFL2Q6UWQ7 119 aa6.35□□□□□ -1.39
TRPM1-202ENST00000397795 PTPRQQ9UMZ3 2332 aa6.35□□□□□ -1.39
TRPM1-202ENST00000397795 LTBP2Q14767 1821 aa6.34□□□□□ -1.39
TRPM1-202ENST00000397795 ACACAQ13085 2346 aa6.34□□□□□ -1.39
TRPM1-202ENST00000397795 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
TRPM1-202ENST00000397795 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
TRPM1-202ENST00000397795 A8MWP4 228 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms