RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
MAP1LC3A-203ENST00000397709 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
MAP1LC3A-203ENST00000397709 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 CKS1BP61024 79 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 C10orf25Q5T742 122 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 UNQ6190/PRO20217Q6UXQ8 127 aa12.62□□□□□ -0.39
MAP1LC3A-203ENST00000397709 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.61□□□□□ -0.39
MAP1LC3A-203ENST00000397709 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
MAP1LC3A-203ENST00000397709 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
MAP1LC3A-203ENST00000397709 J3QQQ9 107 aa12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 C6orf48Q9UBA6 75 aa12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 DYNC1H1Q14204 4646 aaKnown RBP12.6□□□□□ -0.39
MAP1LC3A-203ENST00000397709 RNF151Q2KHN1 245 aa12.59□□□□□ -0.39
MAP1LC3A-203ENST00000397709 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
MAP1LC3A-203ENST00000397709 IGKV2D-26A0A0A0MRZ7 120 aa12.58□□□□□ -0.4
MAP1LC3A-203ENST00000397709 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.4
MAP1LC3A-203ENST00000397709 LOC105371267A0A1B0GV96 52 aa12.58□□□□□ -0.4
MAP1LC3A-203ENST00000397709 DNAH8Q96JB1 4490 aa12.57□□□□□ -0.4
MAP1LC3A-203ENST00000397709 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
MAP1LC3A-203ENST00000397709 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
MAP1LC3A-203ENST00000397709 HSBP1L1C9JCN9 74 aa12.56□□□□□ -0.4
MAP1LC3A-203ENST00000397709 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
MAP1LC3A-203ENST00000397709 NMUP48645 174 aa12.55□□□□□ -0.4
MAP1LC3A-203ENST00000397709 LRP1BQ9NZR2 4599 aa12.54□□□□□ -0.4
MAP1LC3A-203ENST00000397709 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
MAP1LC3A-203ENST00000397709 MYMXA0A1B0GTQ4 84 aa12.53□□□□□ -0.4
MAP1LC3A-203ENST00000397709 GCSHP23434 173 aa12.53□□□□□ -0.4
MAP1LC3A-203ENST00000397709 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
MAP1LC3A-203ENST00000397709 TLX1NBP0CAT3 122 aa12.52□□□□□ -0.41
MAP1LC3A-203ENST00000397709 EPPK1P58107 5090 aaKnown RBP12.51□□□□□ -0.41
MAP1LC3A-203ENST00000397709 HERV-K104P63124 156 aa12.51□□□□□ -0.41
MAP1LC3A-203ENST00000397709 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
MAP1LC3A-203ENST00000397709 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
MAP1LC3A-203ENST00000397709 LOC107984640A0A0U1RRK4 108 aa12.5□□□□□ -0.41
MAP1LC3A-203ENST00000397709 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
MAP1LC3A-203ENST00000397709 VAMP8Q9BV40 100 aa12.5□□□□□ -0.41
MAP1LC3A-203ENST00000397709 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
MAP1LC3A-203ENST00000397709 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
MAP1LC3A-203ENST00000397709 PCP2Q8IVA1 136 aa12.49□□□□□ -0.41
MAP1LC3A-203ENST00000397709 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
MAP1LC3A-203ENST00000397709 PAM16Q9Y3D7 125 aa12.49□□□□□ -0.41
MAP1LC3A-203ENST00000397709 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
MAP1LC3A-203ENST00000397709 NDUFC2-KCTD14E9PQ53 114 aa12.48□□□□□ -0.41
MAP1LC3A-203ENST00000397709 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
MAP1LC3A-203ENST00000397709 A0A0J9YXY3 114 aa12.46□□□□□ -0.41
MAP1LC3A-203ENST00000397709 RPL18AQ02543 176 aaKnown RBP12.46□□□□□ -0.41
MAP1LC3A-203ENST00000397709 COX17Q14061 63 aa12.46□□□□□ -0.41
MAP1LC3A-203ENST00000397709 Q6ZRP5 223 aa12.46□□□□□ -0.41
MAP1LC3A-203ENST00000397709 A0A096LNI7 61 aa12.45□□□□□ -0.42
MAP1LC3A-203ENST00000397709 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
MAP1LC3A-203ENST00000397709 PFN2P35080 140 aa12.45□□□□□ -0.42
MAP1LC3A-203ENST00000397709 MEIG1Q5JSS6 88 aa12.45□□□□□ -0.42
MAP1LC3A-203ENST00000397709 LINC00587B1AMM8 73 aa12.44□□□□□ -0.42
MAP1LC3A-203ENST00000397709 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
MAP1LC3A-203ENST00000397709 PTTG1IPP53801 180 aa12.44□□□□□ -0.42
MAP1LC3A-203ENST00000397709 COX8AP10176 69 aa12.43□□□□□ -0.42
MAP1LC3A-203ENST00000397709 GAGE2BQ13066 116 aa12.43□□□□□ -0.42
MAP1LC3A-203ENST00000397709 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
MAP1LC3A-203ENST00000397709 GAGE2EQ4V326 116 aa12.42□□□□□ -0.42
MAP1LC3A-203ENST00000397709 Q6ZSA8 131 aa12.42□□□□□ -0.42
MAP1LC3A-203ENST00000397709 GAGE2DQ9UEU5 116 aa12.42□□□□□ -0.42
MAP1LC3A-203ENST00000397709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
MAP1LC3A-203ENST00000397709 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 A0A0U1RRA0 63 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 PANO1I0J062 215 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 LINC00158P58513 81 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 FAM30AQ9NZY2 134 aa12.41□□□□□ -0.42
MAP1LC3A-203ENST00000397709 TIMM17BO60830 172 aa12.4□□□□□ -0.42
MAP1LC3A-203ENST00000397709 S100A12P80511 92 aa12.4□□□□□ -0.42
MAP1LC3A-203ENST00000397709 SPACA4Q8TDM5 124 aa12.4□□□□□ -0.42
MAP1LC3A-203ENST00000397709 LINC00474Q9P2X8 69 aa12.4□□□□□ -0.42
MAP1LC3A-203ENST00000397709 APOBP04114 4563 aaKnown RBP12.4□□□□□ -0.42
MAP1LC3A-203ENST00000397709 DLEU1O43261 78 aa12.39□□□□□ -0.43
MAP1LC3A-203ENST00000397709 SCGB1D4Q6XE38 83 aa12.39□□□□□ -0.43
MAP1LC3A-203ENST00000397709 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
MAP1LC3A-203ENST00000397709 LITAFQ99732 161 aa12.39□□□□□ -0.43
MAP1LC3A-203ENST00000397709 C9orf129Q5T035 196 aaKnown RBP12.38□□□□□ -0.43
MAP1LC3A-203ENST00000397709 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
MAP1LC3A-203ENST00000397709 TP73-AS1Q9UF72 201 aa12.38□□□□□ -0.43
MAP1LC3A-203ENST00000397709 ADAMTSL4-AS1Q5T5F5 129 aa12.37□□□□□ -0.43
MAP1LC3A-203ENST00000397709 SND1-IT1Q9HBX3 110 aa12.37□□□□□ -0.43
MAP1LC3A-203ENST00000397709 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
MAP1LC3A-203ENST00000397709 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
MAP1LC3A-203ENST00000397709 DAND5Q8N907 189 aa12.35□□□□□ -0.43
MAP1LC3A-203ENST00000397709 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
MAP1LC3A-203ENST00000397709 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
MAP1LC3A-203ENST00000397709 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
MAP1LC3A-203ENST00000397709 A0A087WYN8 130 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 A0A1W2PNN7 141 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 FAM168BA1KXE4 195 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
MAP1LC3A-203ENST00000397709 SCXQ7RTU7 201 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms