RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 A0A087WTM6 91 aa15.46■□□□□ 0.07
TSPAN4-202ENST00000397396 LINC00587B1AMM8 73 aa15.46■□□□□ 0.07
TSPAN4-202ENST00000397396 WFDC2Q14508 124 aa15.46■□□□□ 0.07
TSPAN4-202ENST00000397396 BOD1L2Q8IYS8 172 aa15.46■□□□□ 0.07
TSPAN4-202ENST00000397396 SACSQ9NZJ4 4579 aa15.46■□□□□ 0.07
TSPAN4-202ENST00000397396 TRBV30A0A0K0K1B3 111 aa15.45■□□□□ 0.06
TSPAN4-202ENST00000397396 C14orf144Q96I85 54 aa15.45■□□□□ 0.06
TSPAN4-202ENST00000397396 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-202ENST00000397396 RTL8CO15255 209 aa15.44■□□□□ 0.06
TSPAN4-202ENST00000397396 SYCNQ0VAF6 134 aa15.44■□□□□ 0.06
TSPAN4-202ENST00000397396 Q8N814 137 aa15.44■□□□□ 0.06
TSPAN4-202ENST00000397396 TSTD3H0UI37 97 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 C2orf82Q6UX34 121 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 SCGB1D4Q6XE38 83 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 LINC00526Q96FQ7 95 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 TTTY13Q9BZ97 58 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 UQCR10Q9UDW1 63 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 CNBPP62633 177 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 LINC00336Q6ZUF6 198 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 CARD19Q96LW7 228 aa15.43■□□□□ 0.06
TSPAN4-202ENST00000397396 CIRBPQ14011 172 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-202ENST00000397396 RNF151Q2KHN1 245 aa15.41■□□□□ 0.06
TSPAN4-202ENST00000397396 MEIG1Q5JSS6 88 aa15.41■□□□□ 0.06
TSPAN4-202ENST00000397396 UNQ6190/PRO20217Q6UXQ8 127 aa15.41■□□□□ 0.06
TSPAN4-202ENST00000397396 A0A0J9YXY3 114 aa15.4■□□□□ 0.06
TSPAN4-202ENST00000397396 Q6ZRU5 148 aa15.4■□□□□ 0.06
TSPAN4-202ENST00000397396 PKIGQ9Y2B9 76 aa15.4■□□□□ 0.06
TSPAN4-202ENST00000397396 RYR3Q15413 4870 aa15.39■□□□□ 0.05
TSPAN4-202ENST00000397396 TIMM17BO60830 172 aa15.39■□□□□ 0.05
TSPAN4-202ENST00000397396 COX17Q14061 63 aa15.39■□□□□ 0.05
TSPAN4-202ENST00000397396 HYDINQ4G0P3 5121 aa15.38■□□□□ 0.05
TSPAN4-202ENST00000397396 TNP2Q05952 138 aa15.38■□□□□ 0.05
TSPAN4-202ENST00000397396 ERG28Q9UKR5 140 aa15.38■□□□□ 0.05
TSPAN4-202ENST00000397396 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-202ENST00000397396 TMEM238C9JI98 176 aa15.37■□□□□ 0.05
TSPAN4-202ENST00000397396 MIEN1Q9BRT3 115 aa15.37■□□□□ 0.05
TSPAN4-202ENST00000397396 PRO1933Q9H354 126 aa15.37■□□□□ 0.05
TSPAN4-202ENST00000397396 C6orf48Q9UBA6 75 aa15.37■□□□□ 0.05
TSPAN4-202ENST00000397396 C10orf25Q5T742 122 aa15.36■□□□□ 0.05
TSPAN4-202ENST00000397396 RYR2Q92736 4967 aa15.35■□□□□ 0.05
TSPAN4-202ENST00000397396 HIGD1BQ9P298 99 aa15.35■□□□□ 0.05
TSPAN4-202ENST00000397396 DNAH10Q8IVF4 4471 aa15.34■□□□□ 0.05
TSPAN4-202ENST00000397396 GCSHP23434 173 aa15.34■□□□□ 0.05
TSPAN4-202ENST00000397396 DNAH2Q9P225 4427 aa15.34■□□□□ 0.05
TSPAN4-202ENST00000397396 SLPIP03973 132 aa15.33■□□□□ 0.04
TSPAN4-202ENST00000397396 Q6ZVH6 145 aa15.32■□□□□ 0.04
TSPAN4-202ENST00000397396 HNRNPA3P51991 378 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-202ENST00000397396 LINC00158P58513 81 aa15.31■□□□□ 0.04
TSPAN4-202ENST00000397396 NDUFC2-KCTD14E9PQ53 114 aa15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 TLX1NBP0CAT3 122 aa15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 SMIM13P0DJ93 91 aa15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 PFN2P35080 140 aa15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 COPS9Q8WXC6 57 aa15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 SPANXB1Q9NS25 103 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-202ENST00000397396 C9orf163Q8N9P6 203 aa15.29■□□□□ 0.04
TSPAN4-202ENST00000397396 TP73-AS1Q9UF72 201 aa15.29■□□□□ 0.04
TSPAN4-202ENST00000397396 C9orf116Q5BN46 136 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-202ENST00000397396 C2orf91Q6ZV80 131 aa15.28■□□□□ 0.04
TSPAN4-202ENST00000397396 SPANXDQ9BXN6 97 aa15.28■□□□□ 0.04
TSPAN4-202ENST00000397396 SPANXCQ9NY87 97 aa15.28■□□□□ 0.04
TSPAN4-202ENST00000397396 DNAH17Q9UFH2 4485 aa15.27■□□□□ 0.04
TSPAN4-202ENST00000397396 IGLV5-52A0A0A0MRZ9 124 aa15.27■□□□□ 0.04
TSPAN4-202ENST00000397396 LOC107984640A0A0U1RRK4 108 aa15.27■□□□□ 0.04
TSPAN4-202ENST00000397396 LITAFQ99732 161 aa15.27■□□□□ 0.04
TSPAN4-202ENST00000397396 SRSF9Q13242 221 aaKnown RBP eCLIP15.26■□□□□ 0.03
TSPAN4-202ENST00000397396 PGPEP1Q9NXJ5 209 aa15.26■□□□□ 0.03
TSPAN4-202ENST00000397396 A0A0U1RRA0 63 aa15.25■□□□□ 0.03
TSPAN4-202ENST00000397396 MIR7-3HGQ8N6C7 128 aa15.25■□□□□ 0.03
TSPAN4-202ENST00000397396 TAL2Q16559 108 aa15.24■□□□□ 0.03
TSPAN4-202ENST00000397396 IFITM1P13164 125 aa15.23■□□□□ 0.03
TSPAN4-202ENST00000397396 RPL18AQ02543 176 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-202ENST00000397396 HIST1H4GQ99525 98 aa15.23■□□□□ 0.03
TSPAN4-202ENST00000397396 PPDPFQ9H3Y8 114 aa15.22■□□□□ 0.03
TSPAN4-202ENST00000397396 PTTG1IPP53801 180 aa15.21■□□□□ 0.03
TSPAN4-202ENST00000397396 HSD52Q0P140 79 aa15.21■□□□□ 0.03
TSPAN4-202ENST00000397396 ADAMTSL4-AS1Q5T5F5 129 aa15.21■□□□□ 0.03
TSPAN4-202ENST00000397396 DDTP30046 118 aa15.2■□□□□ 0.02
TSPAN4-202ENST00000397396 FRAS1Q86XX4 4008 aa15.2■□□□□ 0.02
TSPAN4-202ENST00000397396 Q6ZRP5 223 aa15.19■□□□□ 0.02
TSPAN4-202ENST00000397396 DAND5Q8N907 189 aa15.19■□□□□ 0.02
TSPAN4-202ENST00000397396 SND1-IT1Q9HBX3 110 aa15.18■□□□□ 0.02
TSPAN4-202ENST00000397396 LINC00474Q9P2X8 69 aa15.18■□□□□ 0.02
TSPAN4-202ENST00000397396 C16orf90A8MZG2 172 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 GAGE2EQ4V326 116 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 LINC00308Q8TCZ7 52 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 GAGE2DQ9UEU5 116 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 LOC107984156A0A0G2JMH3 177 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 ARL17AQ8IVW1 177 aa15.17■□□□□ 0.02
TSPAN4-202ENST00000397396 SDIM1Q6ZPB5 146 aa15.16■□□□□ 0.02
TSPAN4-202ENST00000397396 KRTAP10-2P60368 255 aa15.15■□□□□ 0.02
TSPAN4-202ENST00000397396 RPL24P83731 157 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-202ENST00000397396 MUSTN1Q8IVN3 82 aa15.14■□□□□ 0.01
TSPAN4-202ENST00000397396 M0R143 59 aa15.13■□□□□ 0.01
TSPAN4-202ENST00000397396 NPC2P61916 151 aa15.13■□□□□ 0.01
TSPAN4-202ENST00000397396 CTAG1AP78358 180 aa15.13■□□□□ 0.01
TSPAN4-202ENST00000397396 CEND1Q8N111 149 aa15.13■□□□□ 0.01
TSPAN4-202ENST00000397396 XAGE1AQ9HD64 81 aa15.13■□□□□ 0.01
TSPAN4-202ENST00000397396 TMEM238LA0A1B0GVL6 79 aa15.12■□□□□ 0.01
TSPAN4-202ENST00000397396 A6NJY4 79 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms