RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 A0A0J9YXY3 114 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 LINC00587B1AMM8 73 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 USP17L23D6RBM5 183 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 M0R2N4 97 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
LMCD1-202ENST00000397386 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
LMCD1-202ENST00000397386 TIMM17BO60830 172 aa8.35□□□□□ -1.07
LMCD1-202ENST00000397386 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
LMCD1-202ENST00000397386 C14orf177Q52M58 125 aa8.34□□□□□ -1.07
LMCD1-202ENST00000397386 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
LMCD1-202ENST00000397386 C2orf82Q6UX34 121 aa8.34□□□□□ -1.07
LMCD1-202ENST00000397386 TMEM238C9JI98 176 aa8.34□□□□□ -1.08
LMCD1-202ENST00000397386 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.08
LMCD1-202ENST00000397386 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.08
LMCD1-202ENST00000397386 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
LMCD1-202ENST00000397386 LCE6AA0A183 80 aa8.33□□□□□ -1.08
LMCD1-202ENST00000397386 COX17Q14061 63 aa8.33□□□□□ -1.08
LMCD1-202ENST00000397386 TAL2Q16559 108 aa8.33□□□□□ -1.08
LMCD1-202ENST00000397386 Q6ZVH6 145 aa8.33□□□□□ -1.08
LMCD1-202ENST00000397386 PCP4L1A6NKN8 68 aa8.32□□□□□ -1.08
LMCD1-202ENST00000397386 CAMK2N2Q96S95 79 aa8.32□□□□□ -1.08
LMCD1-202ENST00000397386 LITAFQ99732 161 aa8.32□□□□□ -1.08
LMCD1-202ENST00000397386 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
LMCD1-202ENST00000397386 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 LRCOL1A6NCL2 159 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 LINC00526Q96FQ7 95 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
LMCD1-202ENST00000397386 HSD52Q0P140 79 aa8.3□□□□□ -1.08
LMCD1-202ENST00000397386 SYCNQ0VAF6 134 aa8.3□□□□□ -1.08
LMCD1-202ENST00000397386 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
LMCD1-202ENST00000397386 WFDC2Q14508 124 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 LECT2O14960 151 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 GCSHP23434 173 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
LMCD1-202ENST00000397386 ADAMTSL4-AS1Q5T5F5 129 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 Q6ZRU5 148 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 HIST1H4GQ99525 98 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
LMCD1-202ENST00000397386 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
LMCD1-202ENST00000397386 IFITM1P13164 125 aa8.28□□□□□ -1.08
LMCD1-202ENST00000397386 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
LMCD1-202ENST00000397386 CARD19Q96LW7 228 aa8.28□□□□□ -1.08
LMCD1-202ENST00000397386 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
LMCD1-202ENST00000397386 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.27□□□□□ -1.09
LMCD1-202ENST00000397386 M0R143 59 aa8.27□□□□□ -1.09
LMCD1-202ENST00000397386 SLPIP03973 132 aa8.27□□□□□ -1.09
LMCD1-202ENST00000397386 LINC00158P58513 81 aa8.27□□□□□ -1.09
LMCD1-202ENST00000397386 A0A087WTM6 91 aa8.26□□□□□ -1.09
LMCD1-202ENST00000397386 PFN2P35080 140 aa8.26□□□□□ -1.09
LMCD1-202ENST00000397386 CEND1Q8N111 149 aa8.26□□□□□ -1.09
LMCD1-202ENST00000397386 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
LMCD1-202ENST00000397386 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
LMCD1-202ENST00000397386 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
LMCD1-202ENST00000397386 MIR7-3HGQ8N6C7 128 aa8.25□□□□□ -1.09
LMCD1-202ENST00000397386 Q8N814 137 aa8.25□□□□□ -1.09
LMCD1-202ENST00000397386 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
LMCD1-202ENST00000397386 BVES-AS1Q5T3Y7 98 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 DAND5Q8N907 189 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
LMCD1-202ENST00000397386 EREGO14944 169 aa8.23□□□□□ -1.09
LMCD1-202ENST00000397386 RTL8CO15255 209 aa8.23□□□□□ -1.09
LMCD1-202ENST00000397386 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
LMCD1-202ENST00000397386 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
LMCD1-202ENST00000397386 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
LMCD1-202ENST00000397386 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
LMCD1-202ENST00000397386 SND1-IT1Q9HBX3 110 aa8.21□□□□□ -1.1
LMCD1-202ENST00000397386 RYR2Q92736 4967 aa8.21□□□□□ -1.1
LMCD1-202ENST00000397386 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.2□□□□□ -1.1
LMCD1-202ENST00000397386 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
LMCD1-202ENST00000397386 FXYD2P54710 66 aa8.2□□□□□ -1.1
LMCD1-202ENST00000397386 SOSTDC1Q6X4U4 206 aa8.2□□□□□ -1.1
LMCD1-202ENST00000397386 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
LMCD1-202ENST00000397386 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
LMCD1-202ENST00000397386 TNP2Q05952 138 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 RYR3Q15413 4870 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 A4D1N5 150 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 A6NDN8 102 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 NPC2P61916 151 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 Q6ZRP5 223 aa8.19□□□□□ -1.1
LMCD1-202ENST00000397386 NDUFC2O95298 119 aa8.18□□□□□ -1.1
LMCD1-202ENST00000397386 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
LMCD1-202ENST00000397386 CBY1Q9Y3M2 126 aa8.18□□□□□ -1.1
LMCD1-202ENST00000397386 DNAH10Q8IVF4 4471 aa8.17□□□□□ -1.1
LMCD1-202ENST00000397386 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
LMCD1-202ENST00000397386 RPL18AQ02543 176 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms