RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
CAPN3-208ENST00000397204 GAGE2EQ4V326 116 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 EIF5A2Q9GZV4 153 aaKnown RBP5.24□□□□□ -1.57
CAPN3-208ENST00000397204 SMDT1Q9H4I9 107 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 SPANXA1Q9NS26 97 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 C6orf48Q9UBA6 75 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 GAGE2DQ9UEU5 116 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 NAT8BQ9UHF3 227 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 V9GYV3 84 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
CAPN3-208ENST00000397204 A0A1B0GW15 77 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 ZNF727A8MUV8 499 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 CKS2P33552 79 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 RPL39P62891 51 aaKnown RBP5.23□□□□□ -1.57
CAPN3-208ENST00000397204 UBE2BP63146 152 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 KIAA0087Q14695 138 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 FAM19A5Q7Z5A7 132 aaPredicted RBP5.23□□□□□ -1.57
CAPN3-208ENST00000397204 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
CAPN3-208ENST00000397204 TRBV30A0A0K0K1B3 111 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 IFITM10A6NMD0 228 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 NDUFC2-KCTD14E9PQ53 114 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 M0QXV9 152 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 SMIM6P0DI80 62 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 HBBP68871 147 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 IFITM2Q01629 132 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CAPN3-208ENST00000397204 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
CAPN3-208ENST00000397204 ZNF861PO60384 105 aa5.21□□□□□ -1.58
CAPN3-208ENST00000397204 FAM74A3Q4VXF1 159 aa5.21□□□□□ -1.58
CAPN3-208ENST00000397204 ALKAL2Q6UX46 152 aa5.21□□□□□ -1.58
CAPN3-208ENST00000397204 SMIM2Q9BVW6 85 aa5.21□□□□□ -1.58
CAPN3-208ENST00000397204 SMIM27A0A1W2PRY6 76 aa5.2□□□□□ -1.58
CAPN3-208ENST00000397204 PPBPP02775 128 aa5.2□□□□□ -1.58
CAPN3-208ENST00000397204 SRP19P09132 144 aaKnown RBP5.2□□□□□ -1.58
CAPN3-208ENST00000397204 LINC00242Q5T6M2 205 aa5.2□□□□□ -1.58
CAPN3-208ENST00000397204 LINC01561Q8N1V8 128 aa5.2□□□□□ -1.58
CAPN3-208ENST00000397204 PYGO1Q9Y3Y4 419 aa5.2□□□□□ -1.58
CAPN3-208ENST00000397204 NUPR1O60356 82 aa5.19□□□□□ -1.58
CAPN3-208ENST00000397204 S100A8P05109 93 aa5.19□□□□□ -1.58
CAPN3-208ENST00000397204 RAB5AP20339 215 aa5.19□□□□□ -1.58
CAPN3-208ENST00000397204 IFI27P40305 119 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-208ENST00000397204 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
CAPN3-208ENST00000397204 D6R8Y8 96 aa5.18□□□□□ -1.58
CAPN3-208ENST00000397204 TSPAN13O95857 204 aa5.18□□□□□ -1.58
CAPN3-208ENST00000397204 RPL23P62829 140 aaKnown RBP5.18□□□□□ -1.58
CAPN3-208ENST00000397204 C5orf47Q569G3 176 aa5.18□□□□□ -1.58
CAPN3-208ENST00000397204 C2orf82Q6UX34 121 aa5.18□□□□□ -1.58
CAPN3-208ENST00000397204 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
CAPN3-208ENST00000397204 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
CAPN3-208ENST00000397204 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
CAPN3-208ENST00000397204 NPYP01303 97 aa5.17□□□□□ -1.58
CAPN3-208ENST00000397204 C6orf226Q5I0X4 101 aa5.17□□□□□ -1.58
CAPN3-208ENST00000397204 TMEM141Q96I45 108 aa5.17□□□□□ -1.58
CAPN3-208ENST00000397204 C5orf52A6NGY3 159 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 PRSS2P07478 247 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 CRYGAP11844 174 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 RPL28P46779 137 aaKnown RBP5.16□□□□□ -1.58
CAPN3-208ENST00000397204 CKS1BP61024 79 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 HERV-K104P63124 156 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 ADIRFQ15847 76 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 Q6ZN92 141 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 TMEM136Q6ZRR5 245 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 ERASQ7Z444 233 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 CTDSP1Q9GZU7 261 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
CAPN3-208ENST00000397204 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 VAMP3Q15836 100 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 TEX43Q6ZNM6 134 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 ORMDL3Q8N138 153 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 TYMSOSQ8TAI1 123 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 TP73-AS1Q9UF72 201 aa5.15□□□□□ -1.59
CAPN3-208ENST00000397204 A0A1B0GV72 72 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 TRIAP1O43715 76 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 BCE1O60756 84 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 NPSP0C0P6 89 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 SEC61GP60059 68 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 COX19Q49B96 90 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 MRPL54Q6P161 138 aaKnown RBP5.14□□□□□ -1.59
CAPN3-208ENST00000397204 Q8IZM0 81 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
CAPN3-208ENST00000397204 A0A087X002 238 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 AKR1D1P51857 326 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 C2orf66Q6UXQ4 117 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 ATP5L2Q7Z4Y8 100 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 FAM19A3Q7Z5A8 133 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 MRPL55Q7Z7F7 128 aaKnown RBP5.13□□□□□ -1.59
CAPN3-208ENST00000397204 AMELXQ99217 191 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 LAMTOR2Q9Y2Q5 125 aa5.13□□□□□ -1.59
CAPN3-208ENST00000397204 C9JQL5 133 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 F8VRH5 84 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 DLEU1O43261 78 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 SEC11AP67812 179 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 PEA15Q15121 130 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 LINC00173Q6ZV60 143 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 C14orf144Q96I85 54 aa5.12□□□□□ -1.59
CAPN3-208ENST00000397204 CYSLTR1Q9Y271 337 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms