RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
SEC13-206ENST00000397102 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
SEC13-206ENST00000397102 F8VRH5 84 aa8.55□□□□□ -1.04
SEC13-206ENST00000397102 BLOC1S1P78537 153 aa8.55□□□□□ -1.04
SEC13-206ENST00000397102 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
SEC13-206ENST00000397102 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
SEC13-206ENST00000397102 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SEC13-206ENST00000397102 SMIM27A0A1W2PRY6 76 aa8.53□□□□□ -1.04
SEC13-206ENST00000397102 PPBPP02775 128 aa8.53□□□□□ -1.04
SEC13-206ENST00000397102 LINC00337Q8N6G1 96 aa8.53□□□□□ -1.04
SEC13-206ENST00000397102 IGLV5-37A0A075B6J1 123 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 F8W036 122 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
SEC13-206ENST00000397102 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 AMELXQ99217 191 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
SEC13-206ENST00000397102 S100A8P05109 93 aa8.51□□□□□ -1.05
SEC13-206ENST00000397102 CXCL5P42830 114 aa8.51□□□□□ -1.05
SEC13-206ENST00000397102 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
SEC13-206ENST00000397102 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
SEC13-206ENST00000397102 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
SEC13-206ENST00000397102 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
SEC13-206ENST00000397102 VCX2Q9H322 139 aa8.5□□□□□ -1.05
SEC13-206ENST00000397102 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
SEC13-206ENST00000397102 MRPL54Q6P161 138 aaKnown RBP8.49□□□□□ -1.05
SEC13-206ENST00000397102 ALKAL2Q6UX46 152 aa8.49□□□□□ -1.05
SEC13-206ENST00000397102 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
SEC13-206ENST00000397102 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
SEC13-206ENST00000397102 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
SEC13-206ENST00000397102 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
SEC13-206ENST00000397102 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 NPSP0C0P6 89 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
SEC13-206ENST00000397102 HERVK_113P63121 156 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 PRLHP81277 87 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 TCTE3Q8IZS6 198 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
SEC13-206ENST00000397102 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 SEC11AP67812 179 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 ADIRFQ15847 76 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 TMEM136Q6ZRR5 245 aa8.47□□□□□ -1.05
SEC13-206ENST00000397102 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
SEC13-206ENST00000397102 GEMIN7Q9H840 131 aaKnown RBP8.45□□□□□ -1.06
SEC13-206ENST00000397102 LOC389332A0A1B0GUA5 103 aa8.44□□□□□ -1.06
SEC13-206ENST00000397102 IGIPA6NJ69 53 aa8.44□□□□□ -1.06
SEC13-206ENST00000397102 PLEKHB2Q96CS7 222 aa8.44□□□□□ -1.06
SEC13-206ENST00000397102 MAP1LC3AQ9H492 121 aa8.44□□□□□ -1.06
SEC13-206ENST00000397102 NAT8Q9UHE5 227 aa8.44□□□□□ -1.06
SEC13-206ENST00000397102 SCO1O75880 301 aa8.43□□□□□ -1.06
SEC13-206ENST00000397102 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
SEC13-206ENST00000397102 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
SEC13-206ENST00000397102 SMIM1B2RUZ4 78 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 ORMDL2Q53FV1 153 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 Q8N8P6 123 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
SEC13-206ENST00000397102 RAB5BP61020 215 aa8.41□□□□□ -1.06
SEC13-206ENST00000397102 PDZD11Q5EBL8 140 aa8.41□□□□□ -1.06
SEC13-206ENST00000397102 GNB1LQ9BYB4 327 aa8.41□□□□□ -1.06
SEC13-206ENST00000397102 TMEM238C9JI98 176 aa8.4□□□□□ -1.06
SEC13-206ENST00000397102 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
SEC13-206ENST00000397102 ATP5L2Q7Z4Y8 100 aa8.4□□□□□ -1.06
SEC13-206ENST00000397102 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
SEC13-206ENST00000397102 K7EMI3 77 aa8.39□□□□□ -1.07
SEC13-206ENST00000397102 M0R378 163 aa8.39□□□□□ -1.07
SEC13-206ENST00000397102 SPRR4Q96PI1 79 aa8.38□□□□□ -1.07
SEC13-206ENST00000397102 TIMM17AQ99595 171 aa8.38□□□□□ -1.07
SEC13-206ENST00000397102 VPREB1P12018 145 aa8.37□□□□□ -1.07
SEC13-206ENST00000397102 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
SEC13-206ENST00000397102 IGLV5-45A0A087WSX0 123 aa8.36□□□□□ -1.07
SEC13-206ENST00000397102 A0A1B0GVG6 124 aa8.36□□□□□ -1.07
SEC13-206ENST00000397102 SPINK1P00995 79 aa8.36□□□□□ -1.07
SEC13-206ENST00000397102 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
SEC13-206ENST00000397102 Q8NBF4 154 aa8.36□□□□□ -1.07
SEC13-206ENST00000397102 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
SEC13-206ENST00000397102 C9JQL5 133 aa8.35□□□□□ -1.07
SEC13-206ENST00000397102 DAND5Q8N907 189 aa8.35□□□□□ -1.07
SEC13-206ENST00000397102 ATP5LO75964 103 aa8.34□□□□□ -1.07
SEC13-206ENST00000397102 G0S2P27469 103 aa8.34□□□□□ -1.07
SEC13-206ENST00000397102 MT1HP80294 61 aa8.34□□□□□ -1.07
SEC13-206ENST00000397102 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
SEC13-206ENST00000397102 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
SEC13-206ENST00000397102 NDUFA12Q9UI09 145 aa8.34□□□□□ -1.07
SEC13-206ENST00000397102 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
SEC13-206ENST00000397102 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
SEC13-206ENST00000397102 PFN2P35080 140 aa8.33□□□□□ -1.08
SEC13-206ENST00000397102 KRTAP19-2Q3LHN2 52 aa8.33□□□□□ -1.08
SEC13-206ENST00000397102 XP32Q5T750 250 aa8.33□□□□□ -1.08
SEC13-206ENST00000397102 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
SEC13-206ENST00000397102 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
SEC13-206ENST00000397102 ERASQ7Z444 233 aa8.31□□□□□ -1.08
SEC13-206ENST00000397102 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
SEC13-206ENST00000397102 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
SEC13-206ENST00000397102 PEA15Q15121 130 aa8.29□□□□□ -1.08
SEC13-206ENST00000397102 Q8NDZ9 215 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms