RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 SPINK13Q1W4C9 94 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 LINC00308Q8TCZ7 52 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 OBSCN-AS1Q96MR7 158 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 C11orf68Q9H3H3 251 aaKnown RBP3.77□□□□□ -1.81
VPS41-203ENST00000395969 ACACBO00763 2458 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
VPS41-203ENST00000395969 DEFB136Q30KP8 78 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 MPLKIPQ8TAP9 179 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 FAM218AQ96MZ4 157 aa3.77□□□□□ -1.81
VPS41-203ENST00000395969 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 KNCNA6PVL3 124 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 NBPF19A0A087WUL8 3843 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
VPS41-203ENST00000395969 FHL2Q14192 279 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 C14orf132Q9NPU4 83 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 ANK2Q01484 3957 aa3.76□□□□□ -1.81
VPS41-203ENST00000395969 HTN1P15515 57 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 SS18Q15532 418 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 SOSTDC1Q6X4U4 206 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 UBE2D4Q9Y2X8 147 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 DNAL4O96015 105 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 MIFP14174 115 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 C1orf195Q5TG92 126 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 PRIMA1Q86XR5 153 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 SNURFQ9Y675 71 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 IGLV5-39A0A0G2JS06 123 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 APOC4P55056 127 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 COPS9Q8WXC6 57 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 USP9YO00507 2555 aaPredicted RBP3.75□□□□□ -1.81
VPS41-203ENST00000395969 ITPR3Q14573 2671 aa3.75□□□□□ -1.81
VPS41-203ENST00000395969 IGHV3-73A0A0B4J1V6 119 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 K7EQD1 137 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 LOC100131303A0A0U1RQF7 123 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 NDUFC2O95298 119 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 IGKV3-20P01619 116 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 PLA2G1BP04054 148 aaKnown RBP3.74□□□□□ -1.81
VPS41-203ENST00000395969 RPL28P46779 137 aaKnown RBP3.74□□□□□ -1.81
VPS41-203ENST00000395969 MUC7Q8TAX7 377 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 LINC00846Q9NV44 126 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 PTPN13Q12923 2485 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 MXRA5Q9NR99 2828 aa3.74□□□□□ -1.81
VPS41-203ENST00000395969 INAFM1C9JVW0 142 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 C9orf129Q5T035 196 aaKnown RBP3.73□□□□□ -1.81
VPS41-203ENST00000395969 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.73□□□□□ -1.81
VPS41-203ENST00000395969 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 MYO9AB2RTY4 2548 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 TRAV12-2A0A075B6T6 113 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 Q8NAQ8 132 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 CRYBG3Q68DQ2 2970 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 JMJD1CQ15652 2540 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
VPS41-203ENST00000395969 Q6ZSN1 163 aa3.73□□□□□ -1.81
VPS41-203ENST00000395969 FN1P02751 2386 aaKnown RBP3.73□□□□□ -1.81
VPS41-203ENST00000395969 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
VPS41-203ENST00000395969 SLPIP03973 132 aa3.72□□□□□ -1.81
VPS41-203ENST00000395969 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
VPS41-203ENST00000395969 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
VPS41-203ENST00000395969 LRCOL1A6NCL2 159 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 NCR3O14931 201 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 COX6A2Q02221 97 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 KRTAP21-3Q3LHN1 58 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 LYPD5Q6UWN5 251 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 SMR3AQ99954 134 aa3.71□□□□□ -1.81
VPS41-203ENST00000395969 TRAV13-2A0A0B4J235 113 aa3.71□□□□□ -1.82
VPS41-203ENST00000395969 A0A087WYN8 130 aa3.71□□□□□ -1.82
VPS41-203ENST00000395969 SMIM1B2RUZ4 78 aa3.71□□□□□ -1.82
VPS41-203ENST00000395969 Q9UF83 564 aa3.71□□□□□ -1.82
VPS41-203ENST00000395969 SERP1Q9Y6X1 66 aa3.71□□□□□ -1.82
VPS41-203ENST00000395969 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.7□□□□□ -1.82
VPS41-203ENST00000395969 IGKV2-29A2NJV5 120 aaPredicted RBP3.7□□□□□ -1.82
VPS41-203ENST00000395969 RPL36AP83881 106 aaKnown RBP3.7□□□□□ -1.82
VPS41-203ENST00000395969 LINC00242Q5T6M2 205 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 ATP5EP2Q5VTU8 51 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 ENHOQ6UWT2 76 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 NTM-AS1Q6ZSK4 140 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 RPL36ALQ969Q0 106 aaKnown RBP3.7□□□□□ -1.82
VPS41-203ENST00000395969 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 FAM30AQ9NZY2 134 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 IGKV2-28A0A075B6P5 120 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 IGHV3OR16-12A0A075B7B8 117 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 IGKV2D-28P01615 120 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 LINC00337Q8N6G1 96 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 UNC79Q9P2D8 2635 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
VPS41-203ENST00000395969 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 H0YGX0 51 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 H7BZZ5 65 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 CCKP06307 115 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 RMI2Q96E14 147 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 BCE1O60756 84 aa3.69□□□□□ -1.82
VPS41-203ENST00000395969 XCL1P47992 114 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms