RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
MSH5-205ENST00000395853 DEFB104AQ8WTQ1 72 aa6.36□□□□□ -1.39
MSH5-205ENST00000395853 F6UB75 175 aa6.36□□□□□ -1.39
MSH5-205ENST00000395853 I3L2K1 104 aa6.36□□□□□ -1.39
MSH5-205ENST00000395853 IGHV4-31P0DP07 118 aa6.36□□□□□ -1.39
MSH5-205ENST00000395853 POLR2KP53803 58 aaKnown RBP6.36□□□□□ -1.39
MSH5-205ENST00000395853 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
MSH5-205ENST00000395853 Q8N6K4 173 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 NPBQ8NG41 125 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 LMO4P61968 165 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 IGFL4Q6B9Z1 124 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 Q6ZTC4 211 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 S4R3C0 116 aa6.35□□□□□ -1.39
MSH5-205ENST00000395853 K7EIM0 57 aa6.34□□□□□ -1.39
MSH5-205ENST00000395853 IGHV4OR15-8A0A075B7B6 117 aa6.34□□□□□ -1.39
MSH5-205ENST00000395853 A0A087WW49 117 aa6.34□□□□□ -1.39
MSH5-205ENST00000395853 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.4
MSH5-205ENST00000395853 CTSGP08311 255 aa6.34□□□□□ -1.4
MSH5-205ENST00000395853 SYCNQ0VAF6 134 aa6.34□□□□□ -1.4
MSH5-205ENST00000395853 MIR7-3HGQ8N6C7 128 aa6.34□□□□□ -1.4
MSH5-205ENST00000395853 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 A0A087WYN8 130 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 MINOS1Q5TGZ0 78 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 MINOS1-NBL1R4GNA1 71 aa6.33□□□□□ -1.4
MSH5-205ENST00000395853 PRYO14603 147 aa6.32□□□□□ -1.4
MSH5-205ENST00000395853 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
MSH5-205ENST00000395853 C9orf47Q6ZRZ4 202 aa6.32□□□□□ -1.4
MSH5-205ENST00000395853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.32□□□□□ -1.41e-7■■■■■ 27.2
MSH5-205ENST00000395853 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
MSH5-205ENST00000395853 A8MU10 97 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 IGHV3-23P01764 117 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 IGLV11-55A0A075B6I3 123 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 A8MUN3 132 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 LCA10Q71F78 164 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 Q8N9W7 124 aa6.31□□□□□ -1.4
MSH5-205ENST00000395853 CUBNO60494 3623 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 IGHV7-81A0A0B4J1V7 117 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 H0YGX0 51 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 NDUFA1O15239 70 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 NREPQ16612 68 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
MSH5-205ENST00000395853 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 Q8N3U1 123 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 C11orf72Q8NBR9 251 aa6.3□□□□□ -1.4
MSH5-205ENST00000395853 IGHV4-61A0A0C4DH41 118 aa6.29□□□□□ -1.4
MSH5-205ENST00000395853 ATP11AUNQ6ZP68 121 aa6.29□□□□□ -1.4
MSH5-205ENST00000395853 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
MSH5-205ENST00000395853 SPTSSBQ8NFR3 76 aa6.29□□□□□ -1.4
MSH5-205ENST00000395853 DIRC1Q969H9 104 aa6.29□□□□□ -1.4
MSH5-205ENST00000395853 LECT2O14960 151 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 UBE2AP49459 152 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
MSH5-205ENST00000395853 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 SMAD5-AS1Q9Y6J3 95 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 CRPP02741 224 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
MSH5-205ENST00000395853 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
MSH5-205ENST00000395853 SERTAD4-AS1Q5TG53 156 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 BRD3OSQ6XYD6 125 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 IGHV3OR16-8A0A075B7F1 116 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 IGHV3-35A0A0C4DH35 117 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 TRBV6-5A0A0K0K1A5 114 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
MSH5-205ENST00000395853 A6NN06 94 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 G3V318 75 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 CCL24O00175 119 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 MED14OSP0DP75 135 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 LINC00315P59091 139 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 HAMPP81172 84 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
MSH5-205ENST00000395853 F5H697 171 aa6.26□□□□□ -1.41
MSH5-205ENST00000395853 CXCL6P80162 114 aa6.26□□□□□ -1.41
MSH5-205ENST00000395853 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
MSH5-205ENST00000395853 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
MSH5-205ENST00000395853 Q9H8V8 135 aa6.26□□□□□ -1.41
MSH5-205ENST00000395853 IGHV4-38-2P0DP08 117 aa6.25□□□□□ -1.41
MSH5-205ENST00000395853 SLPIP03973 132 aa6.25□□□□□ -1.41
MSH5-205ENST00000395853 C5orf56Q8N8D9 126 aa6.25□□□□□ -1.41
MSH5-205ENST00000395853 NKAPP1Q8N9T2 125 aa6.25□□□□□ -1.41
MSH5-205ENST00000395853 A0A087WWL8 130 aa6.24□□□□□ -1.41
MSH5-205ENST00000395853 Q5VV11 94 aa6.24□□□□□ -1.41
MSH5-205ENST00000395853 Q6ZTI0 123 aa6.24□□□□□ -1.41
MSH5-205ENST00000395853 SMIM11BQ8TCY0 68 aa6.24□□□□□ -1.41
MSH5-205ENST00000395853 BPY2O14599 106 aa6.24□□□□□ -1.41
MSH5-205ENST00000395853 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
MSH5-205ENST00000395853 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
MSH5-205ENST00000395853 B4DSR2 109 aa6.23□□□□□ -1.41
MSH5-205ENST00000395853 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
MSH5-205ENST00000395853 LY6EQ16553 131 aa6.23□□□□□ -1.41
MSH5-205ENST00000395853 PRR9Q5T870 116 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms